RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 NBPF6Q5VWK0 638 aa7.5□□□□□ -1.21
CPNE3-213ENST00000622183 MSL1Q68DK7 614 aa7.5□□□□□ -1.21
CPNE3-213ENST00000622183 REC114Q7Z4M0 266 aa7.5□□□□□ -1.21
CPNE3-213ENST00000622183 CKAP2LQ8IYA6 745 aa7.5□□□□□ -1.21
CPNE3-213ENST00000622183 REXO1Q8N1G1 1221 aaKnown RBP7.5□□□□□ -1.21
CPNE3-213ENST00000622183 NBPF4Q96M43 638 aa7.5□□□□□ -1.21
CPNE3-213ENST00000622183 ZNF408Q9H9D4 720 aa7.5□□□□□ -1.21
CPNE3-213ENST00000622183 BPNT1O95861 308 aa7.49□□□□□ -1.21
CPNE3-213ENST00000622183 BCRP11274 1271 aa7.49□□□□□ -1.21
CPNE3-213ENST00000622183 MAP1SQ66K74 1059 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-213ENST00000622183 C8orf86Q6ZUL3 223 aa7.49□□□□□ -1.21
CPNE3-213ENST00000622183 ILDR2Q71H61 639 aa7.49□□□□□ -1.21
CPNE3-213ENST00000622183 CPLX3Q8WVH0 158 aa7.49□□□□□ -1.21
CPNE3-213ENST00000622183 SRRTQ9BXP5 876 aaKnown RBP7.49□□□□□ -1.21
CPNE3-213ENST00000622183 KRT82Q9NSB4 513 aa7.49□□□□□ -1.21
CPNE3-213ENST00000622183 SHISA8B8ZZ34 492 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 TM4SF5O14894 197 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 ZNF165P49910 485 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 RPL6Q02878 288 aaKnown RBP7.48□□□□□ -1.21
CPNE3-213ENST00000622183 POU4F3Q15319 338 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 CCDC144BQ3MJ40 725 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 MPRIPQ6WCQ1 1025 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 NOP9Q86U38 636 aaKnown RBP7.48□□□□□ -1.21
CPNE3-213ENST00000622183 MAP4K3Q8IVH8 894 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 KLHL23Q8NBE8 558 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 PMFBP1Q8TBY8 1022 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 KCNB2Q92953 911 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 CORO1BQ9BR76 489 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 PPT2Q9UMR5 302 aa7.48□□□□□ -1.21
CPNE3-213ENST00000622183 NID1P14543 1247 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 MAOBP27338 520 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 MCM4P33991 863 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 ETFBP38117 255 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 COL9A3Q14050 684 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-213ENST00000622183 SETDB1Q15047 1291 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 GPBAR1Q8TDU6 330 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 KLHDC7BQ96G42 594 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 SHDQ96IW2 340 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 CARD10Q9BWT7 1032 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 BRMS1Q9HCU9 246 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 MRVI1Q9Y6F6 885 aa7.47□□□□□ -1.21
CPNE3-213ENST00000622183 ECEL1O95672 775 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 IMPDH2P12268 514 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 AMPD1P23109 780 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 HNRNPUQ00839 825 aaKnown RBP eCLIP7.46□□□□□ -1.22
CPNE3-213ENST00000622183 SUZ12Q15022 739 aaKnown RBP7.46□□□□□ -1.22
CPNE3-213ENST00000622183 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-213ENST00000622183 CCDC81Q6ZN84 652 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 FERD3LQ96RJ6 166 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 OSBPL2Q9H1P3 480 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 CCDC86Q9H6F5 360 aaKnown RBP7.46□□□□□ -1.22
CPNE3-213ENST00000622183 EHMT1Q9H9B1 1298 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 PRKAG3Q9UGI9 489 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 ZNRF3Q9ULT6 936 aa7.46□□□□□ -1.22
CPNE3-213ENST00000622183 CELA2BP08218 269 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-213ENST00000622183 SELPP16109 830 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 GIPRP48546 466 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 EIF6P56537 245 aaKnown RBP7.45□□□□□ -1.22
CPNE3-213ENST00000622183 SERINC3Q13530 473 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 GIMAP6Q6P9H5 292 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 ANKS3Q6ZW76 656 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 DTWD1Q8N5C7 304 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 GALNT11Q8NCW6 608 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 ACSBG1Q96GR2 724 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 ZC3H12CQ9C0D7 883 aaKnown RBP7.45□□□□□ -1.22
CPNE3-213ENST00000622183 ZSWIM4Q9H7M6 989 aa7.45□□□□□ -1.22
CPNE3-213ENST00000622183 POLR3KQ9Y2Y1 108 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-213ENST00000622183 KLF4O43474 513 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 SMARCA5O60264 1052 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-213ENST00000622183 ATE1O95260 518 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 DGKGP49619 791 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 CLCQ05315 142 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 HP1BP3Q5SSJ5 553 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-213ENST00000622183 LYPD4Q6UWN0 246 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 GK5Q6ZS86 529 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 DMRTC2Q8IXT2 367 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-213ENST00000622183 FAM177A1Q8N128 213 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-213ENST00000622183 CRBNQ96SW2 442 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 PCDHA4Q9UN74 947 aa7.44□□□□□ -1.22
CPNE3-213ENST00000622183 LOC100289279A0A1B0GTE1 492 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 GFRA2O00451 464 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 DEAF1O75398 565 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-213ENST00000622183 CTSBP07858 339 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 HOXB4P17483 251 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-213ENST00000622183 GMPRP36959 345 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 CDK8P49336 464 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 NLRP12P59046 1061 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 PDE3AQ14432 1141 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 KIF4BQ2VIQ3 1234 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 TNNI3KQ59H18 835 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 WIPI1Q5MNZ9 446 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-213ENST00000622183 LCE2CQ5TA81 110 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 RBBP8NLQ8NC74 664 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-213ENST00000622183 OR6P1Q8NGX9 317 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 DCAF11Q8TEB1 546 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 USP26Q9BXU7 913 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 PIF1Q9H611 641 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 PCDHB14Q9Y5E9 798 aa7.43□□□□□ -1.22
CPNE3-213ENST00000622183 SNCAIPQ9Y6H5 919 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms