RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
SIRPA-204ENST00000622179 ZNF335Q9H4Z2 1342 aaPredicted RBP15.19■□□□□ 0.02
SIRPA-204ENST00000622179 GYG1P46976 350 aa15.19■□□□□ 0.02
SIRPA-204ENST00000622179 TOB2Q14106 344 aaPredicted RBP15.19■□□□□ 0.02
SIRPA-204ENST00000622179 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
SIRPA-204ENST00000622179 HLFQ16534 295 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 TOM1O60784 492 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 HSP90B2PQ58FF3 399 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 SEC31BQ9NQW1 1179 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 KCNH3Q9ULD8 1083 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 KCNQ4P56696 695 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 CLEC17AQ6ZS10 378 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 NLRP10Q86W26 655 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
SIRPA-204ENST00000622179 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
SIRPA-204ENST00000622179 PATL2C9JE40 543 aaKnown RBP15.17■□□□□ 0.02
SIRPA-204ENST00000622179 SNAP23O00161 211 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 ZNF174Q15697 407 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 AKNAD1Q5T1N1 836 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 PAXBP1Q9Y5B6 917 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 CEMIPQ8WUJ3 1361 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 ELP1O95163 1332 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 MCM7P33993 719 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 RRAGBQ5VZM2 374 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 NYXQ9GZU5 481 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 BMP2KQ9NSY1 1161 aaPredicted RBP15.17■□□□□ 0.02
SIRPA-204ENST00000622179 N4BP3O15049 544 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 DNAI1Q9UI46 699 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 DENND2AQ9ULE3 1009 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 PCDHA7Q9UN72 937 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 KRT2P35908 639 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 GNG11P61952 73 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 LRMPQ12912 555 aa15.17■□□□□ 0.02
SIRPA-204ENST00000622179 NOM1Q5C9Z4 860 aaKnown RBP15.17■□□□□ 0.02
SIRPA-204ENST00000622179 IDEP14735 1019 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 HIBADHP31937 336 aaKnown RBP15.16■□□□□ 0.02
SIRPA-204ENST00000622179 KIF4BQ2VIQ3 1234 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 TSC1Q92574 1164 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 CEP89Q96ST8 783 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 CLIC4Q9Y696 253 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 MYO5BQ9ULV0 1848 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 KIF20BQ96Q89 1820 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 POLR2DO15514 142 aaKnown RBP15.16■□□□□ 0.02
SIRPA-204ENST00000622179 CASQ1P31415 396 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 WWC3Q9ULE0 1092 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 VWA3AA6NCI4 1184 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 DEXIO95424 95 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 PRKCSHP14314 528 aaPredicted RBP15.16■□□□□ 0.02
SIRPA-204ENST00000622179 PICALMQ13492 652 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 ADALQ6DHV7 355 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 RTL9Q8NET4 1388 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 KIAA1328Q86T90 577 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 FBXO18Q8NFZ0 1043 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
SIRPA-204ENST00000622179 LOC102724428A0A0B4J2F2 783 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 LDHBP07195 334 aaKnown RBP15.15■□□□□ 0.02
SIRPA-204ENST00000622179 DDIT3P35638 169 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 SIK1P57059 783 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 RILPL1Q5EBL4 403 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 PLIN2Q99541 437 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 CDCA7Q9BWT1 371 aaPredicted RBP15.15■□□□□ 0.02
SIRPA-204ENST00000622179 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 SIGLEC1Q9BZZ2 1709 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 MYL5Q02045 173 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 TTLL11Q8NHH1 800 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 KIF5CO60282 957 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 PDIA6Q15084 440 aa15.15■□□□□ 0.02
SIRPA-204ENST00000622179 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
SIRPA-204ENST00000622179 GJB4Q9NTQ9 266 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 YEATS4O95619 227 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 CALM1P0DP23 149 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 CALM2P0DP24 149 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 CALM3P0DP25 149 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 NDUFA8P51970 172 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 TAF6LQ9Y6J9 622 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 ZNF500O60304 480 aaPredicted RBP15.14■□□□□ 0.01
SIRPA-204ENST00000622179 STAT6P42226 847 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 SAP30BPQ9UHR5 308 aaKnown RBP15.14■□□□□ 0.01
SIRPA-204ENST00000622179 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
SIRPA-204ENST00000622179 ITSN1Q15811 1721 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 BMP15O95972 392 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 GSTO1P78417 241 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 CHRNDQ07001 517 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 VPS54Q9P1Q0 977 aa15.14■□□□□ 0.01
SIRPA-204ENST00000622179 PPP1R1BQ9UD71 204 aaPredicted RBP15.14■□□□□ 0.01
SIRPA-204ENST00000622179 PFKFB1P16118 471 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 ZNF76P36508 570 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 C1orf167Q5SNV9 1468 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 UBE3CQ15386 1083 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 FAM47AQ5JRC9 791 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 TMCO3Q6UWJ1 677 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 CLIC6Q96NY7 704 aa15.13■□□□□ 0.01
SIRPA-204ENST00000622179 ANKRD2Q9GZV1 360 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms