RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 ALX1Q15699 326 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 ADCK5Q3MIX3 580 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 SLF2Q8IX21 1173 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 IPO9Q96P70 1041 aaKnown RBP12.71□□□□□ -0.37
CPNE3-212ENST00000621783 SYT17Q9BSW7 474 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 CTNNA3Q9UI47 895 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.37
CPNE3-212ENST00000621783 DAGLAQ9Y4D2 1042 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 CDK5RAP2Q96SN8 1893 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 PATL2C9JE40 543 aaKnown RBP12.7□□□□□ -0.38
CPNE3-212ENST00000621783 BTDP43251 543 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 PRELPP51888 382 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 STOX1Q6ZVD7 989 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 IFNL3Q8IZI9 196 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 SNX21Q969T3 373 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
CPNE3-212ENST00000621783 JAKMIP1Q96N16 626 aaKnown RBP12.7□□□□□ -0.38
CPNE3-212ENST00000621783 NOL10Q9BSC4 688 aaKnown RBP12.7□□□□□ -0.38
CPNE3-212ENST00000621783 CRNKL1Q9BZJ0 848 aaKnown RBP12.7□□□□□ -0.38
CPNE3-212ENST00000621783 NAPBQ9H115 298 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
CPNE3-212ENST00000621783 FOCADQ5VW36 1801 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 GPR75-ASB3A0A0A6YYF3 556 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 RAD17O75943 681 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
CPNE3-212ENST00000621783 BAG3O95817 575 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
CPNE3-212ENST00000621783 TDO2P48775 406 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 SCNN1DP51172 638 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 PPP4CP60510 307 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 HAND2P61296 217 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 BECN1Q14457 450 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 KRT32Q14532 448 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
CPNE3-212ENST00000621783 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 KIAA0825Q8IV33 1275 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 HSCBQ8IWL3 235 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 SH3RF3Q8TEJ3 882 aaPredicted RBP12.69□□□□□ -0.38
CPNE3-212ENST00000621783 TBC1D2Q9BYX2 928 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
CPNE3-212ENST00000621783 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 TM6SF1Q9BZW5 370 aa12.69□□□□□ -0.38
CPNE3-212ENST00000621783 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 ECM29Q5VYK3 1845 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 PSMD14O00487 310 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 ST18O60284 1047 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 PSMA5P28066 241 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 NEK4P51957 841 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-212ENST00000621783 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 JDP2Q8WYK2 163 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 TEKT1Q969V4 418 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
CPNE3-212ENST00000621783 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
CPNE3-212ENST00000621783 E7EWF7 191 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 SOCS7O14512 581 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 ZNF213O14771 459 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 VIL1P09327 827 aaKnown RBP12.67□□□□□ -0.38
CPNE3-212ENST00000621783 CPA1P15085 419 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 PLCG2P16885 1265 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 CRKP46108 304 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 RHBDL3P58872 404 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 HDLBPQ00341 1268 aaKnown RBP12.67□□□□□ -0.38
CPNE3-212ENST00000621783 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-212ENST00000621783 GIMAP6Q6P9H5 292 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 HHIPL2Q6UWX4 724 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 NEK1Q96PY6 1258 aa12.67□□□□□ -0.38
CPNE3-212ENST00000621783 DCP1AQ9NPI6 582 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-212ENST00000621783 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
CPNE3-212ENST00000621783 YBX3P16989 372 aaKnown RBP eCLIP12.66□□□□□ -0.385e-6■■■■□ 19.4
CPNE3-212ENST00000621783 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 USP5P45974 858 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 CXCL9Q07325 125 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 CIAPIN1Q6FI81 312 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 BLOC1S2Q6QNY1 142 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 RUFY3Q7L099 469 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 ZDHHC15Q96MV8 337 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 TTC14Q96N46 770 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 GMLQ99445 158 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 ATP8A2Q9NTI2 1148 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 CYP46A1Q9Y6A2 500 aa12.66□□□□□ -0.38
CPNE3-212ENST00000621783 K7ELQ4 463 aaPredicted RBP12.65□□□□□ -0.38
CPNE3-212ENST00000621783 SLC4A3P48751 1232 aa12.65□□□□□ -0.38
CPNE3-212ENST00000621783 PPARAQ07869 468 aa12.65□□□□□ -0.38
CPNE3-212ENST00000621783 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
CPNE3-212ENST00000621783 MRIQ9BWK5 157 aa12.65□□□□□ -0.38
CPNE3-212ENST00000621783 PDRG1Q9NUG6 133 aa12.65□□□□□ -0.38
CPNE3-212ENST00000621783 ARPP21Q9UBL0 812 aaPredicted RBP12.65□□□□□ -0.38
CPNE3-212ENST00000621783 MKRN1Q9UHC7 482 aaKnown RBP12.65□□□□□ -0.38
CPNE3-212ENST00000621783 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
CPNE3-212ENST00000621783 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
CPNE3-212ENST00000621783 PCDHAC2Q9Y5I4 1007 aa12.65□□□□□ -0.38
CPNE3-212ENST00000621783 FLT1P17948 1338 aa12.64□□□□□ -0.39
CPNE3-212ENST00000621783 NEDD4P46934 1319 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms