RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 HIP1O00291 1037 aa12.6□□□□□ -0.39
NBPF3-213ENST00000619554 BAG3O95817 575 aa12.6□□□□□ -0.39
NBPF3-213ENST00000619554 EPHX2P34913 555 aa12.6□□□□□ -0.39
NBPF3-213ENST00000619554 DIXDC1Q155Q3 683 aa12.6□□□□□ -0.39
NBPF3-213ENST00000619554 HHIPL2Q6UWX4 724 aa12.6□□□□□ -0.39
NBPF3-213ENST00000619554 ESPNB1AK53 854 aa12.59□□□□□ -0.39
NBPF3-213ENST00000619554 RNF113AO15541 343 aaKnown RBP12.59□□□□□ -0.39
NBPF3-213ENST00000619554 PDE6AP16499 860 aa12.59□□□□□ -0.39
NBPF3-213ENST00000619554 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
NBPF3-213ENST00000619554 EAPPQ56P03 285 aaPredicted RBP12.59□□□□□ -0.39
NBPF3-213ENST00000619554 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
NBPF3-213ENST00000619554 SAMD7Q7Z3H4 446 aa12.59□□□□□ -0.39
NBPF3-213ENST00000619554 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
NBPF3-213ENST00000619554 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
NBPF3-213ENST00000619554 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
NBPF3-213ENST00000619554 GSPT1P15170 499 aaKnown RBP12.58□□□□□ -0.4
NBPF3-213ENST00000619554 SDSP20132 328 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 RABEP1Q15276 862 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 CASC1Q6TDU7 716 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 TAF1DQ9H5J8 278 aaPredicted RBP12.58□□□□□ -0.4
NBPF3-213ENST00000619554 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 TMOD2Q9NZR1 351 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 MROH7-TTC4A0A0A0MT08 1334 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 ZNF532Q9HCE3 1301 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 SHTN1A0MZ66 631 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 PLCG2P16885 1265 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 ADD2P35612 726 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 CERS3Q8IU89 383 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 SBF1O95248 1867 aa12.58□□□□□ -0.4
NBPF3-213ENST00000619554 BTDP43251 543 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 NUCB2P80303 420 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 KLHL40Q2TBA0 621 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 AIDAQ96BJ3 306 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 PPP1R9BQ96SB3 815 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 NMRK2Q9NPI5 230 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 DAGLAQ9Y4D2 1042 aa12.57□□□□□ -0.4
NBPF3-213ENST00000619554 GPR75-ASB3A0A0A6YYF3 556 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 MAGEB6P1A0A0J9YX57 407 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 WNT10BO00744 389 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 HSP90AA1P07900 732 aaKnown RBP12.56□□□□□ -0.4
NBPF3-213ENST00000619554 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 MIGA1Q8NAN2 632 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 APPBP2Q92624 585 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 CWC22Q9HCG8 908 aaKnown RBP12.56□□□□□ -0.4
NBPF3-213ENST00000619554 USP40Q9NVE5 1235 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 GAKO14976 1311 aa12.56□□□□□ -0.4
NBPF3-213ENST00000619554 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
NBPF3-213ENST00000619554 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 ZC3H15Q8WU90 426 aaKnown RBP12.55□□□□□ -0.4
NBPF3-213ENST00000619554 RUFY2Q8WXA3 655 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 TRIM44Q96DX7 344 aaPredicted RBP12.55□□□□□ -0.4
NBPF3-213ENST00000619554 PRMT6Q96LA8 375 aaPredicted RBP12.55□□□□□ -0.4
NBPF3-213ENST00000619554 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
NBPF3-213ENST00000619554 CHD4Q14839 1912 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 TIAM2Q8IVF5 1701 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 TCRBV5S4A2TA0A5A2 114 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 POTECB2RU33 542 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 ZNF384Q8TF68 577 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
NBPF3-213ENST00000619554 VEZTQ9HBM0 779 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 SCN9AQ15858 1988 aa12.55□□□□□ -0.4
NBPF3-213ENST00000619554 DICER1Q9UPY3 1922 aaKnown RBP12.54□□□□□ -0.4
NBPF3-213ENST00000619554 RFX7Q2KHR2 1363 aa12.54□□□□□ -0.4
NBPF3-213ENST00000619554 EGFRP00533 1210 aa12.54□□□□□ -0.4
NBPF3-213ENST00000619554 PPP4CP60510 307 aa12.54□□□□□ -0.4
NBPF3-213ENST00000619554 CWC27Q6UX04 472 aaKnown RBP12.54□□□□□ -0.4
NBPF3-213ENST00000619554 GAS2L3Q86XJ1 694 aa12.54□□□□□ -0.4
NBPF3-213ENST00000619554 TEX11Q8IYF3 940 aa12.54□□□□□ -0.4
NBPF3-213ENST00000619554 TDRD3Q9H7E2 651 aaKnown RBP12.54□□□□□ -0.4
NBPF3-213ENST00000619554 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
NBPF3-213ENST00000619554 CLRN2A0PK11 232 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 MBD4O95243 580 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 TNNI2P48788 182 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 HIRAP54198 1017 aaPredicted RBP12.53□□□□□ -0.4
NBPF3-213ENST00000619554 ZNF445P59923 1031 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 TNFAIP1Q13829 316 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 ZMYM1Q5SVZ6 1142 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 ADGRA1Q86SQ6 560 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
NBPF3-213ENST00000619554 CRNKL1Q9BZJ0 848 aaKnown RBP12.53□□□□□ -0.4
NBPF3-213ENST00000619554 GGA3Q9NZ52 723 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 ZNF70Q9UC06 446 aaPredicted RBP12.53□□□□□ -0.4
NBPF3-213ENST00000619554 PCDHAC2Q9Y5I4 1007 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 RRP9O43818 475 aaKnown RBP12.53□□□□□ -0.4
NBPF3-213ENST00000619554 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
NBPF3-213ENST00000619554 GNAT2P19087 354 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 USP5P45974 858 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 SLFNL1Q499Z3 407 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
NBPF3-213ENST00000619554 ANGEL2Q5VTE6 544 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms