RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 MFSD6Q6ZSS7 791 aa22.37■■□□□ 1.17
PSPC1-206ENST00000619300 NSUN4Q96CB9 384 aaKnown RBP22.37■■□□□ 1.17
PSPC1-206ENST00000619300 KRT23Q9C075 422 aa22.37■■□□□ 1.17
PSPC1-206ENST00000619300 SH2B2O14492 632 aaPredicted RBP22.36■■□□□ 1.17
PSPC1-206ENST00000619300 MECOMQ03112 1051 aa22.36■■□□□ 1.17
PSPC1-206ENST00000619300 CHAF1AQ13111 956 aaPredicted RBP22.36■■□□□ 1.17
PSPC1-206ENST00000619300 IGDCC4Q8TDY8 1250 aa22.36■■□□□ 1.17
PSPC1-206ENST00000619300 STAG1Q8WVM7 1258 aa22.36■■□□□ 1.17
PSPC1-206ENST00000619300 HOXA10P31260 410 aaPredicted RBP22.36■■□□□ 1.17
PSPC1-206ENST00000619300 KRT85P78386 507 aa22.36■■□□□ 1.17
PSPC1-206ENST00000619300 TMED8Q6PL24 325 aaPredicted RBP22.36■■□□□ 1.17
PSPC1-206ENST00000619300 SLC51AQ86UW1 340 aa22.36■■□□□ 1.17
PSPC1-206ENST00000619300 TACC3Q9Y6A5 838 aa22.36■■□□□ 1.17
PSPC1-206ENST00000619300 KLRG2A4D1S0 409 aaPredicted RBP22.35■■□□□ 1.17
PSPC1-206ENST00000619300 BBOX1O75936 387 aa22.35■■□□□ 1.17
PSPC1-206ENST00000619300 ZNF827Q17R98 1081 aa22.35■■□□□ 1.17
PSPC1-206ENST00000619300 C15orf52Q6ZUT6 534 aaKnown RBP22.35■■□□□ 1.17
PSPC1-206ENST00000619300 SDR42E1Q8WUS8 393 aa22.35■■□□□ 1.17
PSPC1-206ENST00000619300 AKT1S1Q96B36 256 aa22.35■■□□□ 1.17
PSPC1-206ENST00000619300 ZSCAN16Q9H4T2 348 aaPredicted RBP22.35■■□□□ 1.17
PSPC1-206ENST00000619300 ZSWIM5Q9P217 1185 aa22.35■■□□□ 1.17
PSPC1-206ENST00000619300 TCHHQ07283 1943 aa22.35■■□□□ 1.17
PSPC1-206ENST00000619300 RXRBP28702 533 aa22.35■■□□□ 1.17
PSPC1-206ENST00000619300 DYNLL1P63167 89 aaKnown RBP22.35■■□□□ 1.17
PSPC1-206ENST00000619300 SYAP1Q96A49 352 aaPredicted RBP22.35■■□□□ 1.17
PSPC1-206ENST00000619300 CACNA1SQ13698 1873 aa22.34■■□□□ 1.17
PSPC1-206ENST00000619300 KDM4AO75164 1064 aa22.34■■□□□ 1.17
PSPC1-206ENST00000619300 GPSM2P81274 684 aa22.34■■□□□ 1.17
PSPC1-206ENST00000619300 PPARAQ07869 468 aa22.34■■□□□ 1.17
PSPC1-206ENST00000619300 RESTQ13127 1097 aa22.34■■□□□ 1.17
PSPC1-206ENST00000619300 SPTY2D1Q68D10 685 aaPredicted RBP22.34■■□□□ 1.17
PSPC1-206ENST00000619300 FAM173BQ6P4H8 233 aa22.34■■□□□ 1.17
PSPC1-206ENST00000619300 NLGN1Q8N2Q7 840 aa22.34■■□□□ 1.17
PSPC1-206ENST00000619300 RNF41Q9H4P4 317 aaPredicted RBP22.34■■□□□ 1.17
PSPC1-206ENST00000619300 FDPSP14324 419 aaKnown RBP22.33■■□□□ 1.17
PSPC1-206ENST00000619300 TDRD7Q8NHU6 1098 aaKnown RBP22.33■■□□□ 1.17
PSPC1-206ENST00000619300 CRAMP1Q96RY5 1269 aa22.33■■□□□ 1.17
PSPC1-206ENST00000619300 ANAPC4Q9UJX5 808 aa22.33■■□□□ 1.17
PSPC1-206ENST00000619300 PRDX5P30044 214 aa22.33■■□□□ 1.16
PSPC1-206ENST00000619300 TMEM67Q5HYA8 995 aa22.33■■□□□ 1.16
PSPC1-206ENST00000619300 SGMS1Q86VZ5 419 aa22.33■■□□□ 1.16
PSPC1-206ENST00000619300 COL23A1Q86Y22 540 aaPredicted RBP22.33■■□□□ 1.16
PSPC1-206ENST00000619300 BRIP1Q9BX63 1249 aa22.33■■□□□ 1.16
PSPC1-206ENST00000619300 CPLX1O14810 134 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 IGSF3O75054 1194 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 ATP2B4P23634 1241 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 LIFRP42702 1097 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 GIMAP6Q6P9H5 292 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 ZNF804AQ7Z570 1209 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 WDR66Q8TBY9 1149 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 LY9Q9HBG7 655 aa22.32■■□□□ 1.16
PSPC1-206ENST00000619300 MINDY4BA8MYZ0 360 aa22.31■■□□□ 1.16
PSPC1-206ENST00000619300 PPFIA3O75145 1194 aa22.31■■□□□ 1.16
PSPC1-206ENST00000619300 RAB11FIP4Q86YS3 637 aa22.31■■□□□ 1.16
PSPC1-206ENST00000619300 SCAND2PQ9GZW5 306 aaPredicted RBP22.31■■□□□ 1.16
PSPC1-206ENST00000619300 IFIT3O14879 490 aaKnown RBP22.31■■□□□ 1.16
PSPC1-206ENST00000619300 RRP12Q5JTH9 1297 aaKnown RBP22.31■■□□□ 1.16
PSPC1-206ENST00000619300 APOA5Q6Q788 366 aa22.31■■□□□ 1.16
PSPC1-206ENST00000619300 FLAD1Q8NFF5 587 aa22.31■■□□□ 1.16
PSPC1-206ENST00000619300 SENP2Q9HC62 589 aa22.31■■□□□ 1.16
PSPC1-206ENST00000619300 JAG2Q9Y219 1238 aa22.31■■□□□ 1.16
PSPC1-206ENST00000619300 ELP1O95163 1332 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 NFXL1Q6ZNB6 911 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 TTC6Q86TZ1 520 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 MTA3Q9BTC8 594 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 TOMM22Q9NS69 142 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 GGA1Q9UJY5 639 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 TIAM2Q8IVF5 1701 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 SYCE3A1L190 88 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 UFL1O94874 794 aa22.3■■□□□ 1.16
PSPC1-206ENST00000619300 METAP2P50579 478 aaKnown RBP eCLIP22.3■■□□□ 1.16
PSPC1-206ENST00000619300 TFIP11Q9UBB9 837 aaKnown RBP22.3■■□□□ 1.16
PSPC1-206ENST00000619300 FOSBP53539 338 aa22.29■■□□□ 1.16
PSPC1-206ENST00000619300 LRSAM1Q6UWE0 723 aa22.29■■□□□ 1.16
PSPC1-206ENST00000619300 GPR101Q96P66 508 aaPredicted RBP22.29■■□□□ 1.16
PSPC1-206ENST00000619300 AATFQ9NY61 560 aaKnown RBP eCLIP22.29■■□□□ 1.169e-9■■□□□ 13.1
PSPC1-206ENST00000619300 PODXL2Q9NZ53 605 aa22.29■■□□□ 1.16
PSPC1-206ENST00000619300 ORC3Q9UBD5 711 aaPredicted RBP22.29■■□□□ 1.16
PSPC1-206ENST00000619300 ZBTB43O43298 467 aa22.28■■□□□ 1.16
PSPC1-206ENST00000619300 SART3Q15020 963 aaKnown RBP22.28■■□□□ 1.16
PSPC1-206ENST00000619300 DZIP1Q86YF9 867 aaKnown RBP22.28■■□□□ 1.16
PSPC1-206ENST00000619300 PANK2Q9BZ23 570 aa22.28■■□□□ 1.16
PSPC1-206ENST00000619300 CRNKL1Q9BZJ0 848 aaKnown RBP22.28■■□□□ 1.16
PSPC1-206ENST00000619300 LDHBP07195 334 aaKnown RBP22.28■■□□□ 1.16
PSPC1-206ENST00000619300 ADD1P35611 737 aaKnown RBP22.28■■□□□ 1.16
PSPC1-206ENST00000619300 TMC4Q7Z404 712 aa22.28■■□□□ 1.16
PSPC1-206ENST00000619300 STK11IPQ8N1F8 1099 aa22.28■■□□□ 1.16
PSPC1-206ENST00000619300 CCDC69A6NI79 296 aa22.27■■□□□ 1.16
PSPC1-206ENST00000619300 CTR9Q6PD62 1173 aa22.27■■□□□ 1.16
PSPC1-206ENST00000619300 SPATA32Q96LK8 384 aa22.27■■□□□ 1.16
PSPC1-206ENST00000619300 CFAP45Q9UL16 551 aa22.27■■□□□ 1.16
PSPC1-206ENST00000619300 SLC12A7Q9Y666 1083 aa22.27■■□□□ 1.16
PSPC1-206ENST00000619300 CDKL5O76039 1030 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 TPRNQ4KMQ1 711 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 CPLX2Q6PUV4 134 aaKnown RBP22.26■■□□□ 1.15
PSPC1-206ENST00000619300 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 LEO1Q8WVC0 666 aaPredicted RBP22.26■■□□□ 1.15
PSPC1-206ENST00000619300 ESR2Q92731 530 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 CD209Q9NNX6 404 aa22.26■■□□□ 1.15
PSPC1-206ENST00000619300 ATP8A2Q9NTI2 1148 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms