RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 MSL1Q68DK7 614 aa29.8■■■□□ 2.36
VEGFC-202ENST00000618562 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.79■■■□□ 2.36
VEGFC-202ENST00000618562 LTBP1Q14766 1721 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 NCOA7Q8NI08 942 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 PARP3Q9Y6F1 533 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 SLC4A4Q9Y6R1 1079 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 CHD4Q14839 1912 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 MSNP26038 577 aaKnown RBP29.78■■■□□ 2.36
VEGFC-202ENST00000618562 NAA16Q6N069 864 aaPredicted RBP29.78■■■□□ 2.36
VEGFC-202ENST00000618562 FBXL16Q8N461 479 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 RNF214Q8ND24 703 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 GTF3C6Q969F1 213 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 NAPBQ9H115 298 aa29.78■■■□□ 2.36
VEGFC-202ENST00000618562 COL11A2P13942 1736 aaPredicted RBP29.78■■■□□ 2.36
VEGFC-202ENST00000618562 MAST2Q6P0Q8 1798 aa29.77■■■□□ 2.36
VEGFC-202ENST00000618562 UFL1O94874 794 aa29.77■■■□□ 2.36
VEGFC-202ENST00000618562 SRGNP10124 158 aa29.77■■■□□ 2.36
VEGFC-202ENST00000618562 UVSSAQ2YD98 709 aa29.77■■■□□ 2.36
VEGFC-202ENST00000618562 CCDC88AQ3V6T2 1871 aa29.77■■■□□ 2.36
VEGFC-202ENST00000618562 NSUN4Q96CB9 384 aaKnown RBP29.77■■■□□ 2.36
VEGFC-202ENST00000618562 RIOK1Q9BRS2 568 aaKnown RBP29.77■■■□□ 2.36
VEGFC-202ENST00000618562 MAGEB6P1A0A0J9YX57 407 aa29.76■■■□□ 2.36
VEGFC-202ENST00000618562 ATP2B4P23634 1241 aa29.76■■■□□ 2.36
VEGFC-202ENST00000618562 APOBRQ0VD83 1088 aa29.76■■■□□ 2.36
VEGFC-202ENST00000618562 TDRD7Q8NHU6 1098 aaKnown RBP29.76■■■□□ 2.36
VEGFC-202ENST00000618562 PODXL2Q9NZ53 605 aa29.76■■■□□ 2.36
VEGFC-202ENST00000618562 JAG2Q9Y219 1238 aa29.76■■■□□ 2.36
VEGFC-202ENST00000618562 KRT85P78386 507 aa29.76■■■□□ 2.35
VEGFC-202ENST00000618562 MECOMQ03112 1051 aa29.76■■■□□ 2.35
VEGFC-202ENST00000618562 SLC15A2Q16348 729 aa29.76■■■□□ 2.35
VEGFC-202ENST00000618562 GGA1Q9UJY5 639 aa29.76■■■□□ 2.35
VEGFC-202ENST00000618562 NOL7Q9UMY1 257 aaKnown RBP29.76■■■□□ 2.35
VEGFC-202ENST00000618562 ELP1O95163 1332 aa29.75■■■□□ 2.35
VEGFC-202ENST00000618562 PRDX5P30044 214 aa29.75■■■□□ 2.35
VEGFC-202ENST00000618562 MCM5P33992 734 aa29.75■■■□□ 2.35
VEGFC-202ENST00000618562 ANTXR2P58335 489 aa29.75■■■□□ 2.35
VEGFC-202ENST00000618562 CDC37L1Q7L3B6 337 aa29.75■■■□□ 2.35
VEGFC-202ENST00000618562 ZNF804AQ7Z570 1209 aa29.75■■■□□ 2.35
VEGFC-202ENST00000618562 RALYLQ86SE5 291 aaKnown RBP29.75■■■□□ 2.35
VEGFC-202ENST00000618562 TIAM2Q8IVF5 1701 aa29.75■■■□□ 2.35
VEGFC-202ENST00000618562 PPEF1O14829 653 aaPredicted RBP29.74■■■□□ 2.35
VEGFC-202ENST00000618562 PRC1O43663 620 aa29.74■■■□□ 2.35
VEGFC-202ENST00000618562 TMC4Q7Z404 712 aa29.74■■■□□ 2.35
VEGFC-202ENST00000618562 NACAP1Q9BZK3 213 aa29.74■■■□□ 2.35
VEGFC-202ENST00000618562 GPHNQ9NQX3 736 aaPredicted RBP29.74■■■□□ 2.35
VEGFC-202ENST00000618562 QSER1Q2KHR3 1735 aa29.73■■■□□ 2.35
VEGFC-202ENST00000618562 PFKFB2O60825 505 aa29.73■■■□□ 2.35
VEGFC-202ENST00000618562 NKX2-3Q8TAU0 364 aa29.73■■■□□ 2.35
VEGFC-202ENST00000618562 POLLQ9UGP5 575 aa29.73■■■□□ 2.35
VEGFC-202ENST00000618562 NPR1P16066 1061 aa29.73■■■□□ 2.35
VEGFC-202ENST00000618562 SCRN1Q12765 414 aa29.73■■■□□ 2.35
VEGFC-202ENST00000618562 WDR19Q8NEZ3 1342 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 SALL1Q9NSC2 1324 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 TDO2P48775 406 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 DYNLL1P63167 89 aaKnown RBP29.72■■■□□ 2.35
VEGFC-202ENST00000618562 SP8Q8IXZ3 490 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 TBC1D16Q8TBP0 767 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 CCDC39Q9UFE4 941 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 PDE6BP35913 854 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 TRDNQ13061 729 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 SDR42E1Q8WUS8 393 aa29.72■■■□□ 2.35
VEGFC-202ENST00000618562 KIAA1551Q9HCM1 1747 aa29.71■■■□□ 2.35
VEGFC-202ENST00000618562 NEDD4P46934 1319 aa29.71■■■□□ 2.35
VEGFC-202ENST00000618562 EVCP57679 992 aa29.71■■■□□ 2.35
VEGFC-202ENST00000618562 ATP6V0A2Q9Y487 856 aa29.71■■■□□ 2.35
VEGFC-202ENST00000618562 CTDSPL2Q05D32 466 aa29.7■■■□□ 2.35
VEGFC-202ENST00000618562 WDR66Q8TBY9 1149 aa29.7■■■□□ 2.35
VEGFC-202ENST00000618562 STK32BQ9NY57 414 aa29.7■■■□□ 2.35
VEGFC-202ENST00000618562 TACC3Q9Y6A5 838 aa29.7■■■□□ 2.35
VEGFC-202ENST00000618562 ZNF274Q96GC6 653 aaPredicted RBP29.7■■■□□ 2.34
VEGFC-202ENST00000618562 NAP1L5Q96NT1 182 aaPredicted RBP29.7■■■□□ 2.34
VEGFC-202ENST00000618562 CD209Q9NNX6 404 aa29.7■■■□□ 2.34
VEGFC-202ENST00000618562 PDIA3P30101 505 aaKnown RBP29.69■■■□□ 2.34
VEGFC-202ENST00000618562 CYB5R4Q7L1T6 521 aa29.69■■■□□ 2.34
VEGFC-202ENST00000618562 SCAND2PQ9GZW5 306 aaPredicted RBP29.69■■■□□ 2.34
VEGFC-202ENST00000618562 INCENPQ9NQS7 918 aa29.69■■■□□ 2.34
VEGFC-202ENST00000618562 B4E1Z4 1266 aa29.68■■■□□ 2.34
VEGFC-202ENST00000618562 SPTY2D1Q68D10 685 aaPredicted RBP29.68■■■□□ 2.34
VEGFC-202ENST00000618562 BAZ2AQ9UIF9 1905 aaKnown RBP29.68■■■□□ 2.34
VEGFC-202ENST00000618562 JAK2O60674 1132 aa29.68■■■□□ 2.34
VEGFC-202ENST00000618562 TTC6Q86TZ1 520 aa29.68■■■□□ 2.34
VEGFC-202ENST00000618562 LLPHQ9BRT6 129 aaKnown RBP29.68■■■□□ 2.34
VEGFC-202ENST00000618562 IL1R1P14778 569 aa29.67■■■□□ 2.34
VEGFC-202ENST00000618562 TMED8Q6PL24 325 aaPredicted RBP29.67■■■□□ 2.34
VEGFC-202ENST00000618562 FERMT3Q86UX7 667 aa29.67■■■□□ 2.34
VEGFC-202ENST00000618562 ZKSCAN5Q9Y2L8 839 aa29.67■■■□□ 2.34
VEGFC-202ENST00000618562 AKNAD1Q5T1N1 836 aa29.67■■■□□ 2.34
VEGFC-202ENST00000618562 FUCA2Q9BTY2 467 aa29.67■■■□□ 2.34
VEGFC-202ENST00000618562 DUOX1Q9NRD9 1551 aa29.66■■■□□ 2.34
VEGFC-202ENST00000618562 ZNF500O60304 480 aaPredicted RBP29.66■■■□□ 2.34
VEGFC-202ENST00000618562 MASTLQ96GX5 879 aa29.66■■■□□ 2.34
VEGFC-202ENST00000618562 C6orf229H3BNL8 230 aa29.65■■■□□ 2.34
VEGFC-202ENST00000618562 ALDH1B1P30837 517 aa29.65■■■□□ 2.34
VEGFC-202ENST00000618562 CCT2P78371 535 aaKnown RBP29.65■■■□□ 2.34
VEGFC-202ENST00000618562 DZIP1Q86YF9 867 aaKnown RBP29.65■■■□□ 2.34
VEGFC-202ENST00000618562 STAG1Q8WVM7 1258 aa29.65■■■□□ 2.34
VEGFC-202ENST00000618562 AATFQ9NY61 560 aaKnown RBP eCLIP29.65■■■□□ 2.34
VEGFC-202ENST00000618562 LDHBP07195 334 aaKnown RBP29.65■■■□□ 2.34
VEGFC-202ENST00000618562 GRIK5Q16478 980 aa29.65■■■□□ 2.34
VEGFC-202ENST00000618562 OLFM4Q6UX06 510 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms