RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ABCC12Q96J65 1359 aa23.56■■□□□ 1.36
NEK3-208ENST00000618534 MCAMP43121 646 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 TCIRG1Q13488 830 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 SENP2Q9HC62 589 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 RIC1Q4ADV7 1423 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 ERVV-2B6SEH9 535 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 CDC27P30260 824 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 UBASH3AP57075 661 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 MYL5Q02045 173 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 HOMER1Q86YM7 354 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 PAPPAQ13219 1627 aa23.55■■□□□ 1.36
NEK3-208ENST00000618534 SH2B2O14492 632 aaPredicted RBP23.54■■□□□ 1.36
NEK3-208ENST00000618534 PPP6R2O75170 966 aa23.54■■□□□ 1.36
NEK3-208ENST00000618534 CLIC6Q96NY7 704 aa23.54■■□□□ 1.36
NEK3-208ENST00000618534 SERPINC1P01008 464 aa23.54■■□□□ 1.36
NEK3-208ENST00000618534 GNL2Q13823 731 aaKnown RBP23.54■■□□□ 1.36
NEK3-208ENST00000618534 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.54■■□□□ 1.36
NEK3-208ENST00000618534 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.54■■□□□ 1.36
NEK3-208ENST00000618534 ECM29Q5VYK3 1845 aa23.54■■□□□ 1.36
NEK3-208ENST00000618534 H2AFXP16104 143 aaPredicted RBP23.53■■□□□ 1.36
NEK3-208ENST00000618534 ADD2P35612 726 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 IFIT5Q13325 482 aaKnown RBP23.53■■□□□ 1.36
NEK3-208ENST00000618534 APOA5Q6Q788 366 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 MAP3K14Q99558 947 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 CDKL5O76039 1030 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 PTPN21Q16825 1174 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 RGS22Q8NE09 1264 aa23.53■■□□□ 1.36
NEK3-208ENST00000618534 AKAP11Q9UKA4 1901 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 ETF1P62495 437 aaKnown RBP23.52■■□□□ 1.36
NEK3-208ENST00000618534 CFAP100Q494V2 611 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 SLC9C2Q5TAH2 1124 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 RESP18Q5W5W9 173 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 DNAI1Q9UI46 699 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 B4E1Z4 1266 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 GOLGA8FQ08AF8 430 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 GOLGA8DPQ0D2H9 430 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 METTL24Q5JXM2 366 aa23.52■■□□□ 1.36
NEK3-208ENST00000618534 METTL16Q86W50 562 aaKnown RBP23.52■■□□□ 1.36
NEK3-208ENST00000618534 FAM237AA0A1B0GTK4 181 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 TMEM232C9JQI7 657 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 CBFA2T2O43439 604 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 TUBB4AP04350 444 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 APPP05067 770 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 PCCAP05165 728 aaPredicted RBP23.51■■□□□ 1.35
NEK3-208ENST00000618534 CSF1RP07333 972 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 TERF2Q15554 542 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 SYNE4Q8N205 404 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 PHLPP2Q6ZVD8 1323 aa23.51■■□□□ 1.35
NEK3-208ENST00000618534 TNS2Q63HR2 1409 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 RANBP6O60518 1105 aaKnown RBP23.5■■□□□ 1.35
NEK3-208ENST00000618534 LONRF3Q496Y0 759 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 CPLX2Q6PUV4 134 aaKnown RBP23.5■■□□□ 1.35
NEK3-208ENST00000618534 VSTM4Q8IW00 320 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 PLA2G12BQ9BX93 195 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 TMX1Q9H3N1 280 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 PIH1D3Q9NQM4 214 aaKnown RBP23.5■■□□□ 1.35
NEK3-208ENST00000618534 ST7Q9NRC1 585 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 ATRNO75882 1429 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 UBE2Q2LH0YL09 131 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 CCP110O43303 1012 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 TRIM65Q6PJ69 517 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 FOXP4Q8IVH2 680 aaPredicted RBP23.5■■□□□ 1.35
NEK3-208ENST00000618534 MYL10Q9BUA6 226 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 FANCLQ9NW38 375 aa23.5■■□□□ 1.35
NEK3-208ENST00000618534 MYO5AQ9Y4I1 1855 aaKnown RBP23.49■■□□□ 1.35
NEK3-208ENST00000618534 FANCGO15287 622 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 NTRK3Q16288 839 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 TOM1L2Q6ZVM7 507 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 RIPOR2Q9Y4F9 1068 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 ZBTB43O43298 467 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 IDH1O75874 414 aaKnown RBP23.49■■□□□ 1.35
NEK3-208ENST00000618534 CLCN6P51797 869 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 TRIM28Q13263 835 aaKnown RBP23.49■■□□□ 1.35
NEK3-208ENST00000618534 ARHGAP29Q52LW3 1261 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 OLFM4Q6UX06 510 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 KRBA2Q6ZNG9 492 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 ZBTB38Q8NAP3 1195 aaPredicted RBP23.49■■□□□ 1.35
NEK3-208ENST00000618534 UTP14AQ9BVJ6 771 aaKnown RBP23.49■■□□□ 1.35
NEK3-208ENST00000618534 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.49■■□□□ 1.35
NEK3-208ENST00000618534 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
NEK3-208ENST00000618534 TOP1P11387 765 aaKnown RBP23.48■■□□□ 1.35
NEK3-208ENST00000618534 IARSP41252 1262 aaKnown RBP23.48■■□□□ 1.35
NEK3-208ENST00000618534 NFXL1Q6ZNB6 911 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 KCNH3Q9ULD8 1083 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 PCDHA5Q9Y5H7 936 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 UBN2Q6ZU65 1347 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 GOLGA8AA7E2F4 631 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 CUTAO60888 179 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 PDE4BQ07343 736 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 TRIM29Q14134 588 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 LDHAL6AQ6ZMR3 332 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 REXO1L1PQ8IX06 675 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 CNNM3Q8NE01 707 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 IGDCC4Q8TDY8 1250 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 INCENPQ9NQS7 918 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 FAM217BQ9NTX9 383 aaPredicted RBP23.48■■□□□ 1.35
NEK3-208ENST00000618534 INTS13Q9NVM9 706 aa23.48■■□□□ 1.35
NEK3-208ENST00000618534 WDR17Q8IZU2 1322 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms