RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ASTN2O75129 1339 aaPredicted RBP27.37■■□□□ 1.97
CBWD3-213ENST00000618217 POLR2AP24928 1970 aaKnown RBP27.37■■□□□ 1.97
CBWD3-213ENST00000618217 BTDP43251 543 aa27.37■■□□□ 1.97
CBWD3-213ENST00000618217 ZMYM1Q5SVZ6 1142 aa27.37■■□□□ 1.97
CBWD3-213ENST00000618217 APPBP2Q92624 585 aa27.37■■□□□ 1.97
CBWD3-213ENST00000618217 RHBDL3P58872 404 aa27.36■■□□□ 1.97
CBWD3-213ENST00000618217 CDC42EP5Q6NZY7 148 aa27.36■■□□□ 1.97
CBWD3-213ENST00000618217 MIGA1Q8NAN2 632 aa27.36■■□□□ 1.97
CBWD3-213ENST00000618217 ZNF784Q8NCA9 323 aaPredicted RBP27.36■■□□□ 1.97
CBWD3-213ENST00000618217 OSBP2Q969R2 916 aa27.36■■□□□ 1.97
CBWD3-213ENST00000618217 RIOK1Q9BRS2 568 aaKnown RBP27.36■■□□□ 1.97
CBWD3-213ENST00000618217 PUS7LQ9H0K6 701 aaKnown RBP27.36■■□□□ 1.97
CBWD3-213ENST00000618217 TDRD3Q9H7E2 651 aaKnown RBP27.36■■□□□ 1.97
CBWD3-213ENST00000618217 PGAP2Q9UHJ9 254 aa27.36■■□□□ 1.97
CBWD3-213ENST00000618217 AATFQ9NY61 560 aaKnown RBP eCLIP27.35■■□□□ 1.97
CBWD3-213ENST00000618217 CDK5RAP2Q96SN8 1893 aa27.35■■□□□ 1.97
CBWD3-213ENST00000618217 SPDYE2Q495Y8 402 aa27.34■■□□□ 1.97
CBWD3-213ENST00000618217 POTEIP0CG38 1075 aa27.34■■□□□ 1.97
CBWD3-213ENST00000618217 POTEJP0CG39 1038 aa27.34■■□□□ 1.97
CBWD3-213ENST00000618217 DYNLL1P63167 89 aaKnown RBP27.34■■□□□ 1.97
CBWD3-213ENST00000618217 ZC3H15Q8WU90 426 aaKnown RBP27.34■■□□□ 1.97
CBWD3-213ENST00000618217 FAM227BQ96M60 508 aa27.34■■□□□ 1.97
CBWD3-213ENST00000618217 ZNF70Q9UC06 446 aaPredicted RBP27.34■■□□□ 1.97
CBWD3-213ENST00000618217 KIF3CO14782 793 aa27.33■■□□□ 1.97
CBWD3-213ENST00000618217 BAG3O95817 575 aa27.33■■□□□ 1.97
CBWD3-213ENST00000618217 EAPPQ56P03 285 aaPredicted RBP27.33■■□□□ 1.97
CBWD3-213ENST00000618217 SEC62Q99442 399 aaKnown RBP27.33■■□□□ 1.97
CBWD3-213ENST00000618217 USP40Q9NVE5 1235 aa27.33■■□□□ 1.97
CBWD3-213ENST00000618217 A0A0D9SFI3 127 aa27.32■■□□□ 1.96
CBWD3-213ENST00000618217 MAGEB6P1A0A0J9YX57 407 aa27.32■■□□□ 1.96
CBWD3-213ENST00000618217 CHMLP26374 656 aa27.32■■□□□ 1.96
CBWD3-213ENST00000618217 NMIQ13287 307 aaPredicted RBP27.32■■□□□ 1.96
CBWD3-213ENST00000618217 CLRN2A0PK11 232 aa27.31■■□□□ 1.96
CBWD3-213ENST00000618217 HIP1O00291 1037 aa27.31■■□□□ 1.96
CBWD3-213ENST00000618217 MYO1BO43795 1136 aa27.31■■□□□ 1.96
CBWD3-213ENST00000618217 SH3RF3Q8TEJ3 882 aaPredicted RBP27.31■■□□□ 1.96
CBWD3-213ENST00000618217 NOL10Q9BSC4 688 aaKnown RBP27.31■■□□□ 1.96
CBWD3-213ENST00000618217 HELLSQ9NRZ9 838 aa27.31■■□□□ 1.96
CBWD3-213ENST00000618217 M0R2C6 588 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 PLCG2P16885 1265 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 CERS3Q8IU89 383 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 LCORLQ8N3X6 602 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 FOCADQ5VW36 1801 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 WDHD1O75717 1129 aaPredicted RBP27.3■■□□□ 1.96
CBWD3-213ENST00000618217 MBD4O95243 580 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 ANGEL2Q5VTE6 544 aaKnown RBP27.3■■□□□ 1.96
CBWD3-213ENST00000618217 DIAPH3Q9NSV4 1193 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 GGA3Q9NZ52 723 aa27.3■■□□□ 1.96
CBWD3-213ENST00000618217 CACNB3P54284 484 aa27.29■■□□□ 1.96
CBWD3-213ENST00000618217 FKBP1CQ5VVH2 108 aa27.29■■□□□ 1.96
CBWD3-213ENST00000618217 STRBPQ96SI9 672 aaKnown RBP27.29■■□□□ 1.96
CBWD3-213ENST00000618217 ARMT1Q9H993 441 aa27.29■■□□□ 1.96
CBWD3-213ENST00000618217 PITPNM2Q9BZ72 1349 aa27.29■■□□□ 1.96
CBWD3-213ENST00000618217 MCMDC2Q4G0Z9 681 aa27.28■■□□□ 1.96
CBWD3-213ENST00000618217 CWC27Q6UX04 472 aaKnown RBP27.28■■□□□ 1.96
CBWD3-213ENST00000618217 LDHDQ86WU2 507 aa27.28■■□□□ 1.96
CBWD3-213ENST00000618217 IDI2Q9BXS1 227 aa27.28■■□□□ 1.96
CBWD3-213ENST00000618217 NFIAQ12857 509 aa27.27■■□□□ 1.96
CBWD3-213ENST00000618217 AIDAQ96BJ3 306 aa27.27■■□□□ 1.96
CBWD3-213ENST00000618217 GPAA1O43292 621 aa27.27■■□□□ 1.96
CBWD3-213ENST00000618217 TEX11Q8IYF3 940 aa27.27■■□□□ 1.96
CBWD3-213ENST00000618217 IL25Q9H293 177 aa27.27■■□□□ 1.96
CBWD3-213ENST00000618217 FAM198AQ9UFP1 575 aa27.27■■□□□ 1.96
CBWD3-213ENST00000618217 NPM3O75607 178 aaKnown RBP27.26■■□□□ 1.95
CBWD3-213ENST00000618217 DDX4Q9NQI0 724 aaKnown RBP27.26■■□□□ 1.95
CBWD3-213ENST00000618217 CNTNAP1P78357 1384 aa27.25■■□□□ 1.95
CBWD3-213ENST00000618217 CCDC129Q6ZRS4 1044 aa27.25■■□□□ 1.95
CBWD3-213ENST00000618217 VEZTQ9HBM0 779 aa27.25■■□□□ 1.95
CBWD3-213ENST00000618217 SCAF8Q9UPN6 1271 aaKnown RBP27.25■■□□□ 1.95
CBWD3-213ENST00000618217 CLEC11AQ9Y240 323 aa27.25■■□□□ 1.95
CBWD3-213ENST00000618217 CDC45O75419 566 aa27.24■■□□□ 1.95
CBWD3-213ENST00000618217 ZNF589Q86UQ0 364 aaPredicted RBP27.24■■□□□ 1.95
CBWD3-213ENST00000618217 APOBEC3FQ8IUX4 373 aaKnown RBP27.24■■□□□ 1.95
CBWD3-213ENST00000618217 DCPSQ96C86 337 aaKnown RBP27.24■■□□□ 1.95
CBWD3-213ENST00000618217 TMOD2Q9NZR1 351 aa27.24■■□□□ 1.95
CBWD3-213ENST00000618217 MKRN1Q9UHC7 482 aaKnown RBP27.24■■□□□ 1.95
CBWD3-213ENST00000618217 TCP10L2B9ZVM9 353 aa27.23■■□□□ 1.95
CBWD3-213ENST00000618217 PRKAB2O43741 272 aa27.23■■□□□ 1.95
CBWD3-213ENST00000618217 FAM83AQ86UY5 434 aa27.23■■□□□ 1.95
CBWD3-213ENST00000618217 CRNKL1Q9BZJ0 848 aaKnown RBP27.23■■□□□ 1.95
CBWD3-213ENST00000618217 FOXP2O15409 715 aa27.23■■□□□ 1.95
CBWD3-213ENST00000618217 MAP1SQ66K74 1059 aaPredicted RBP27.23■■□□□ 1.95
CBWD3-213ENST00000618217 ZFPM1Q8IX07 1006 aa27.23■■□□□ 1.95
CBWD3-213ENST00000618217 TGFBRAP1Q8WUH2 860 aa27.23■■□□□ 1.95
CBWD3-213ENST00000618217 DEFB129Q9H1M3 183 aa27.22■■□□□ 1.95
CBWD3-213ENST00000618217 SGSM2O43147 1006 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 ENTPD3O75355 529 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 FLT1P17948 1338 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 TNFAIP1Q13829 316 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 CHADLQ6NUI6 762 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 CCDC171Q6TFL3 1326 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 KRT26Q7Z3Y9 468 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 SDR42E1Q8WUS8 393 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 RUFY2Q8WXA3 655 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 RAD50Q92878 1312 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 SLC4A4Q9Y6R1 1079 aa27.21■■□□□ 1.95
CBWD3-213ENST00000618217 GSG1L2A8MUP6 293 aa27.2■■□□□ 1.95
CBWD3-213ENST00000618217 GNAT2P19087 354 aa27.2■■□□□ 1.95
CBWD3-213ENST00000618217 TCP10Q12799 353 aa27.2■■□□□ 1.95
CBWD3-213ENST00000618217 RASA3Q14644 834 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms