RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TFCP2Q12800 502 aa11.96□□□□□ -0.5
CLTCL1-209ENST00000617103 LRMPQ12912 555 aa11.96□□□□□ -0.5
CLTCL1-209ENST00000617103 NOX5Q96PH1 765 aa11.96□□□□□ -0.5
CLTCL1-209ENST00000617103 FEZ2Q9UHY8 353 aaPredicted RBP11.96□□□□□ -0.5
CLTCL1-209ENST00000617103 CWF19L2Q2TBE0 894 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 POLR2DO15514 142 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC110Q8TBZ0 833 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 MRFAP1L1Q96HT8 127 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 PLCD1P51178 756 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 TRAF1Q13077 416 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 AKAP4Q5JQC9 854 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC63Q8NA47 563 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 PPFIA4O75335 1185 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 EEF2P13639 858 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 ATP2A2P16615 1042 aaKnown RBP11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 RAPGEF1Q13905 1077 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 SEPT6Q14141 434 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 TSNAXIP1Q2TAA8 658 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 SEL1L2Q5TEA6 688 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 GPT2Q8TD30 523 aa11.95□□□□□ -0.5
CLTCL1-209ENST00000617103 GNA11P29992 359 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 GSTO1P78417 241 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 WHAMMP3Q1A5X7 153 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 GOLGA5Q8TBA6 731 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 CFAP57Q96MR6 1250 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 GBP1P32455 592 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 PAK1Q13153 545 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 NEDD9Q14511 834 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 SLC4A8Q2Y0W8 1093 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 BICD1Q96G01 975 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 PPP1R12CQ9BZL4 782 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 SYNCQ9H7C4 482 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 NCOA5Q9HCD5 579 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 TRAF5O00463 557 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 RPL13P26373 211 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 MAGEA1P43355 309 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 ZNF174Q15697 407 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 LRRC8AQ8IWT6 810 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 CSGALNACT2Q8N6G5 542 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 UTP11Q9Y3A2 253 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 ADGRL1O94910 1474 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 GPATCH8Q9UKJ3 1502 aaKnown RBP11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 DEXIO95424 95 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 ATP6V1AP38606 617 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 FBXO31Q5XUX0 539 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC51Q96ER9 411 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 MYCBPQ99417 103 aaPredicted RBP11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 SLF1Q9BQI6 1058 aa11.94□□□□□ -0.5
CLTCL1-209ENST00000617103 ZFYVE9O95405 1425 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 CIB2O75838 187 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 GJC1P36383 396 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 VSIG1Q86XK7 387 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 PLIN2Q99541 437 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 RBM28Q9NW13 759 aaKnown RBP11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 DMRT2Q9Y5R5 561 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 COMMD10Q9Y6G5 202 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 SV2BQ7L1I2 683 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 ANAPC4Q9UJX5 808 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 CFAP221Q4G0U5 840 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 G2E3Q7L622 706 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 BAIAP2L1Q9UHR4 511 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 SAR1BQ9Y6B6 198 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 PDE4DQ08499 809 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 POSTNQ15063 836 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 SLC9C1Q4G0N8 1177 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 SPATS2Q86XZ4 545 aaKnown RBP11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 DIS3L2Q8IYB7 885 aaKnown RBP11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 MED4Q9NPJ6 270 aa11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 ANGEL1Q9UNK9 670 aaKnown RBP11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 BLMP54132 1417 aaPredicted RBP11.93□□□□□ -0.5
CLTCL1-209ENST00000617103 ARHGEF12Q9NZN5 1544 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 E7EVH7 732 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 NOL3O60936 208 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 RNASE9P60153 205 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 MTMR3Q13615 1198 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 OTUD7BQ6GQQ9 843 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 CEP128Q6ZU80 1094 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 TAOK1Q7L7X3 1001 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 FAM227BQ96M60 508 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 CAPN7Q9Y6W3 813 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 COL17A1Q9UMD9 1497 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 ATP8B1O43520 1251 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC38Q502W7 563 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 ADALQ6DHV7 355 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 CNNM4Q6P4Q7 775 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 SLC39A6Q13433 755 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 PKP1Q13835 747 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 FYB2Q5VWT5 728 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 CCDC65Q8IXS2 484 aa11.92□□□□□ -0.5
CLTCL1-209ENST00000617103 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms