RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 CLRN2A0PK11 232 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 FLT3LGP49771 235 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 MRPS5P82675 430 aaKnown RBP13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 SMAD3P84022 425 aaKnown RBP13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 SNAPC2Q13487 334 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 DLGAP5Q15398 846 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 MTMR14Q8NCE2 650 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 NECAB3Q96P71 396 aaPredicted RBP13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 VEZTQ9HBM0 779 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 CSADQ9Y600 493 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 XDHP47989 1333 aa13.59□□□□□ -0.23
AP003900.1-202ENST00000616952 MED23Q9ULK4 1368 aa13.58□□□□□ -0.23
AP003900.1-202ENST00000616952 LRP10Q7Z4F1 713 aa13.58□□□□□ -0.24
AP003900.1-202ENST00000616952 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
AP003900.1-202ENST00000616952 PANK3Q9H999 370 aa13.58□□□□□ -0.24
AP003900.1-202ENST00000616952 COL3A1P02461 1466 aaPredicted RBP13.58□□□□□ -0.24
AP003900.1-202ENST00000616952 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 MYO1BO43795 1136 aa13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 PPP1R37O75864 691 aa13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 IRF5Q13568 498 aa13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 RASA3Q14644 834 aa13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 THUMPD2Q9BTF0 503 aaKnown RBP13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 ECM29Q5VYK3 1845 aa13.57□□□□□ -0.24
AP003900.1-202ENST00000616952 MAP3K9P80192 1104 aa13.56□□□□□ -0.24
AP003900.1-202ENST00000616952 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
AP003900.1-202ENST00000616952 EPHX3Q9H6B9 360 aa13.56□□□□□ -0.24
AP003900.1-202ENST00000616952 PCDHAC2Q9Y5I4 1007 aa13.56□□□□□ -0.24
AP003900.1-202ENST00000616952 PDHXO00330 501 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 IRF6O14896 467 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 BCRP11274 1271 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 ATP2B4P23634 1241 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 GRIN2CQ14957 1233 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 SHHQ15465 462 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 ANKRD23Q86SG2 305 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 FAM89AQ96GI7 184 aa13.55□□□□□ -0.24
AP003900.1-202ENST00000616952 DNAH12Q6ZR08 3092 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 PPM1EQ8WY54 764 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 SEC31BQ9NQW1 1179 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 SNCAIPQ9Y6H5 919 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 AOX1Q06278 1338 aa13.54□□□□□ -0.24
AP003900.1-202ENST00000616952 COL6A1P12109 1028 aa13.53□□□□□ -0.24
AP003900.1-202ENST00000616952 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
AP003900.1-202ENST00000616952 PPIL2Q13356 520 aa13.53□□□□□ -0.24
AP003900.1-202ENST00000616952 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
AP003900.1-202ENST00000616952 COA1Q9GZY4 146 aa13.53□□□□□ -0.24
AP003900.1-202ENST00000616952 TNPO2O14787 897 aaKnown RBP13.52□□□□□ -0.25
AP003900.1-202ENST00000616952 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
AP003900.1-202ENST00000616952 TNFAIP1Q13829 316 aa13.52□□□□□ -0.25
AP003900.1-202ENST00000616952 PDIA6Q15084 440 aa13.52□□□□□ -0.25
AP003900.1-202ENST00000616952 PARK7Q99497 189 aaKnown RBP13.52□□□□□ -0.25
AP003900.1-202ENST00000616952 C11orf16Q9NQ32 467 aa13.52□□□□□ -0.25
AP003900.1-202ENST00000616952 MGAMO43451 1857 aa13.52□□□□□ -0.25
AP003900.1-202ENST00000616952 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
AP003900.1-202ENST00000616952 GPR37L1O60883 481 aa13.51□□□□□ -0.25
AP003900.1-202ENST00000616952 PROSER3Q2NL68 480 aa13.51□□□□□ -0.25
AP003900.1-202ENST00000616952 POTEEQ6S8J3 1075 aa13.51□□□□□ -0.25
AP003900.1-202ENST00000616952 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
AP003900.1-202ENST00000616952 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.252e-8■■□□□ 13.1
AP003900.1-202ENST00000616952 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
AP003900.1-202ENST00000616952 LTBP2Q14767 1821 aa13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 MAST2Q6P0Q8 1798 aa13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 FAM86C2PA6NEL3 165 aa13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 HMGCRP04035 888 aa13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 ANXA1P04083 346 aa13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 FOXK2Q01167 660 aa13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 RTL5Q5HYW3 569 aaPredicted RBP13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 PRMT6Q96LA8 375 aaPredicted RBP13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 HMX1Q9NP08 348 aaPredicted RBP13.5□□□□□ -0.25
AP003900.1-202ENST00000616952 IRS4O14654 1257 aaPredicted RBP13.49□□□□□ -0.25
AP003900.1-202ENST00000616952 GTF2IP78347 998 aa13.49□□□□□ -0.25
AP003900.1-202ENST00000616952 NHLH1Q02575 133 aa13.49□□□□□ -0.25
AP003900.1-202ENST00000616952 AKNAD1Q5T1N1 836 aa13.49□□□□□ -0.25
AP003900.1-202ENST00000616952 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
AP003900.1-202ENST00000616952 CYP2C8P10632 490 aa13.48□□□□□ -0.25
AP003900.1-202ENST00000616952 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
AP003900.1-202ENST00000616952 COPS6Q7L5N1 327 aa13.48□□□□□ -0.25
AP003900.1-202ENST00000616952 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
AP003900.1-202ENST00000616952 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
AP003900.1-202ENST00000616952 PRKAG2Q9UGJ0 569 aa13.48□□□□□ -0.25
AP003900.1-202ENST00000616952 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
AP003900.1-202ENST00000616952 ARAP2Q8WZ64 1704 aa13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 BMP1P13497 986 aa13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 TXNRD3Q86VQ6 643 aa13.47□□□□□ -0.25
AP003900.1-202ENST00000616952 XAGE3Q8WTP9 111 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms