RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ERCC4Q92889 916 aaPredicted RBP15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 CBX8Q9HC52 389 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 SLIT1O75093 1534 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 USP21Q9UK80 565 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 SNAP23O00161 211 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
PPP4R3B-206ENST00000616407 ERVV-1B6SEH8 477 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 UBASH3AP57075 661 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 ISCA1Q9BUE6 129 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 PXDNLA1KZ92 1463 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 PICALMQ13492 652 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 NSUN7Q8NE18 718 aaKnown RBP15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 DHX58Q96C10 678 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 ZNHIT6Q9NWK9 470 aaKnown RBP15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 WWC3Q9ULE0 1092 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 SKILP12757 684 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 HEATR3Q7Z4Q2 680 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 KRI1Q8N9T8 703 aaKnown RBP15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 BMP2KQ9NSY1 1161 aaPredicted RBP15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 OFD1O75665 1012 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 DEXIO95424 95 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 CHGBP05060 677 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 FAM182BQ5T319 152 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 MYSM1Q5VVJ2 828 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 PPP1R9BQ96SB3 815 aa15.13■□□□□ 0.01
PPP4R3B-206ENST00000616407 USP42Q9H9J4 1324 aaKnown RBP15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 RIMBP2O15034 1052 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 USPL1Q5W0Q7 1092 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 ZC3H12CQ9C0D7 883 aaKnown RBP15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 KCNJ14Q9UNX9 436 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 hCG_1642624A0A1W2PR95 340 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 BMP15O95972 392 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 ADD2P35612 726 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 KRT2P35908 639 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 GNAQP50148 359 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 KIF18AQ8NI77 898 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 KAZALD1Q96I82 304 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 RIMS1Q86UR5 1692 aaKnown RBP15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 TOB2Q14106 344 aaPredicted RBP15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 CMTR1Q8N1G2 835 aaKnown RBP15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 CCDC12Q8WUD4 166 aaPredicted RBP15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 TMOD2Q9NZR1 351 aa15.12■□□□□ 0.01
PPP4R3B-206ENST00000616407 SPECC1Q5M775 1068 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 TANGO6Q9C0B7 1094 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 EIF5P55010 431 aaKnown RBP15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 CCDC70Q6NSX1 233 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 ATG9AQ7Z3C6 839 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 USP17L21D6R901 530 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 UFL1O94874 794 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 CYP19A1P11511 503 aaPredicted RBP15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 MCAMP43121 646 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 PPARAQ07869 468 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 SF3B2Q13435 895 aaKnown RBP15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 RILPL1Q5EBL4 403 aa15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 NOC3LQ8WTT2 800 aaKnown RBP15.11■□□□□ 0.01
PPP4R3B-206ENST00000616407 ZNF202O95125 648 aa15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 GOLGA6L1Q8N7Z2 621 aa15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 SAP30BPQ9UHR5 308 aaKnown RBP15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 ELP1O95163 1332 aa15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 CLEC17AQ6ZS10 378 aa15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 FBXO18Q8NFZ0 1043 aa15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 PIH1D3Q9NQM4 214 aaKnown RBP15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 IFNKQ9P0W0 207 aa15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
PPP4R3B-206ENST00000616407 KIF2AO00139 706 aaPredicted RBP15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 ZNF174Q15697 407 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 ZNF76P36508 570 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 FTOQ9C0B1 505 aaKnown RBP eCLIP15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 KCNH3Q9ULD8 1083 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 ZSCAN12O43309 604 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 YEATS4O95619 227 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 MCM7P33993 719 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 TRIM28Q13263 835 aaKnown RBP15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 ZNF654Q8IZM8 581 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 C17orf53Q8N3J3 647 aaPredicted RBP15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 RBM28Q9NW13 759 aaKnown RBP15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 SALL3Q9BXA9 1300 aa15.09■□□□□ 0.01
PPP4R3B-206ENST00000616407 UTYO14607 1347 aa15.08■□□□□ 0.01
PPP4R3B-206ENST00000616407 PRKAB2O43741 272 aa15.08■□□□□ 0.01
PPP4R3B-206ENST00000616407 CALML3P27482 149 aa15.08■□□□□ 0.01
PPP4R3B-206ENST00000616407 CCDC148Q8NFR7 591 aa15.08■□□□□ 0.01
PPP4R3B-206ENST00000616407 RRP9O43818 475 aaKnown RBP15.08■□□□□ 0
PPP4R3B-206ENST00000616407 NAPAP54920 295 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 GPS2Q13227 327 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 ERFEQ4G0M1 354 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 ARHGAP29Q52LW3 1261 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 ADALQ6DHV7 355 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 TEX11Q8IYF3 940 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 RASGRF1Q13972 1273 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 FAM47AQ5JRC9 791 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 WDR66Q8TBY9 1149 aa15.08■□□□□ 0
PPP4R3B-206ENST00000616407 RAB34Q9BZG1 259 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms