RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	MBD4	O95243	580 aa		27.66	■■■□□ 2.02
ACACA-238	ENST00000616352	BTD	P43251	543 aa		27.66	■■■□□ 2.02
ACACA-238	ENST00000616352	AIDA	Q96BJ3	306 aa		27.66	■■■□□ 2.02
ACACA-238	ENST00000616352	CCDC171	Q6TFL3	1326 aa		27.66	■■■□□ 2.02
ACACA-238	ENST00000616352	DYNLL1	P63167	89 aa	Known RBP	27.65	■■■□□ 2.02
ACACA-238	ENST00000616352	LCORL	Q8N3X6	602 aa		27.65	■■■□□ 2.02
ACACA-238	ENST00000616352	ZBED3	Q96IU2	234 aa	Predicted RBP	27.65	■■■□□ 2.02
ACACA-238	ENST00000616352	STRBP	Q96SI9	672 aa	Known RBP	27.65	■■■□□ 2.02
ACACA-238	ENST00000616352	NAV1	Q8NEY1	1877 aa		27.64	■■■□□ 2.02
ACACA-238	ENST00000616352	ARMT1	Q9H993	441 aa		27.64	■■■□□ 2.02
ACACA-238	ENST00000616352	MYOZ2	Q9NPC6	264 aa		27.64	■■■□□ 2.02
ACACA-238	ENST00000616352	BAG3	O95817	575 aa		27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	CERS3	Q8IU89	383 aa		27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	MYH1	P12882	1939 aa		27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	SPDYE2B	A6NHP3	402 aa		27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	SPDYE6	P0CI01	402 aa		27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	RBM5	P52756	815 aa	Known RBP eCLIP	27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	RHBDL3	P58872	404 aa		27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	PRMT6	Q96LA8	375 aa	Predicted RBP	27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	NOL10	Q9BSC4	688 aa	Known RBP	27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	POLR2A	P24928	1970 aa	Known RBP	27.63	■■■□□ 2.01
ACACA-238	ENST00000616352	DDX60L	Q5H9U9	1706 aa	Known RBP	27.62	■■■□□ 2.01
ACACA-238	ENST00000616352	EGFR	P00533	1210 aa		27.62	■■■□□ 2.01
ACACA-238	ENST00000616352	MFAP1	P55081	439 aa	Known RBP	27.62	■■■□□ 2.01
ACACA-238	ENST00000616352	DLGAP5	Q15398	846 aa		27.62	■■■□□ 2.01
ACACA-238	ENST00000616352		H7C1D1	291 aa		27.61	■■■□□ 2.01
ACACA-238	ENST00000616352	EPS15	P42566	896 aa		27.61	■■■□□ 2.01
ACACA-238	ENST00000616352	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	27.61	■■■□□ 2.01
ACACA-238	ENST00000616352	PLCG2	P16885	1265 aa		27.6	■■■□□ 2.01
ACACA-238	ENST00000616352	SAMD7	Q7Z3H4	446 aa		27.6	■■■□□ 2.01
ACACA-238	ENST00000616352	BACH2	Q9BYV9	841 aa		27.6	■■■□□ 2.01
ACACA-238	ENST00000616352	WNT10B	O00744	389 aa		27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	FOXP2	O15409	715 aa		27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	SEC24B	O95487	1268 aa		27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	LMOD1	P29536	600 aa	Predicted RBP	27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	CDC42EP5	Q6NZY7	148 aa		27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	LAMA4	Q16363	1823 aa		27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	GNAT2	P19087	354 aa		27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	VPS53	Q5VIR6	699 aa		27.59	■■■□□ 2.01
ACACA-238	ENST00000616352	HSPD1	P10809	573 aa	Known RBP	27.58	■■■□□ 2.01
ACACA-238	ENST00000616352	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.58	■■■□□ 2.01
ACACA-238	ENST00000616352	LSG1	Q9H089	658 aa	Known RBP	27.58	■■■□□ 2.01
ACACA-238	ENST00000616352	LAMB1	P07942	1786 aa		27.58	■■■□□ 2.01
ACACA-238	ENST00000616352	POTEC	B2RU33	542 aa		27.57	■■■□□ 2
ACACA-238	ENST00000616352	PRKAB2	O43741	272 aa		27.57	■■■□□ 2
ACACA-238	ENST00000616352	KIF4B	Q2VIQ3	1234 aa		27.57	■■■□□ 2
ACACA-238	ENST00000616352	NBPF9	Q3BBW0	867 aa		27.57	■■■□□ 2
ACACA-238	ENST00000616352	TRPM4	Q8TD43	1214 aa		27.57	■■■□□ 2
ACACA-238	ENST00000616352	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.57	■■■□□ 2
ACACA-238	ENST00000616352	ADARB2	Q9NS39	739 aa	Known RBP	27.57	■■■□□ 2
ACACA-238	ENST00000616352	USP40	Q9NVE5	1235 aa		27.57	■■■□□ 2
ACACA-238	ENST00000616352	SLC4A4	Q9Y6R1	1079 aa		27.57	■■■□□ 2
ACACA-238	ENST00000616352	REC8	O95072	547 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	PTH1R	Q03431	593 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	TDRD3	Q9H7E2	651 aa	Known RBP	27.56	■■■□□ 2
ACACA-238	ENST00000616352	ANO2	Q9NQ90	1003 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	HACL1	Q9UJ83	578 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	RPAP1	Q9BWH6	1393 aa	Predicted RBP	27.56	■■■□□ 2
ACACA-238	ENST00000616352	GSG1L2	A8MUP6	293 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	WDHD1	O75717	1129 aa	Predicted RBP	27.56	■■■□□ 2
ACACA-238	ENST00000616352	RBM26	Q5T8P6	1007 aa	Known RBP	27.56	■■■□□ 2
ACACA-238	ENST00000616352	TEX11	Q8IYF3	940 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	SDR42E1	Q8WUS8	393 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	DSCC1	Q9BVC3	393 aa		27.56	■■■□□ 2
ACACA-238	ENST00000616352	PATL2	C9JE40	543 aa	Known RBP	27.55	■■■□□ 2
ACACA-238	ENST00000616352	SPDYE2	Q495Y8	402 aa		27.55	■■■□□ 2
ACACA-238	ENST00000616352	KIAA1211	Q6ZU35	1233 aa		27.55	■■■□□ 2
ACACA-238	ENST00000616352	EIF5B	O60841	1220 aa	Known RBP	27.54	■■■□□ 2
ACACA-238	ENST00000616352	HIRA	P54198	1017 aa	Predicted RBP	27.54	■■■□□ 2
ACACA-238	ENST00000616352	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	27.54	■■■□□ 2
ACACA-238	ENST00000616352	MKRN1	Q9UHC7	482 aa	Known RBP	27.54	■■■□□ 2
ACACA-238	ENST00000616352	IQCA1L	A6NCM1	817 aa		27.53	■■■□□ 2
ACACA-238	ENST00000616352	MAP4K1	Q92918	833 aa		27.53	■■■□□ 2
ACACA-238	ENST00000616352	IDI2	Q9BXS1	227 aa		27.53	■■■□□ 2
ACACA-238	ENST00000616352	ZNF70	Q9UC06	446 aa	Predicted RBP	27.53	■■■□□ 2
ACACA-238	ENST00000616352	MYO1B	O43795	1136 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	TGFBRAP1	Q8WUH2	860 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.52	■■■□□ 2
ACACA-238	ENST00000616352	ATP8A2	Q9NTI2	1148 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	EPB41L2	O43491	1005 aa	Known RBP	27.52	■■■□□ 2
ACACA-238	ENST00000616352	EPHX2	P34913	555 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	NFIA	Q12857	509 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	ALX1	Q15699	326 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	GIMAP6	Q6P9H5	292 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	IFNL3	Q8IZI9	196 aa		27.52	■■■□□ 2
ACACA-238	ENST00000616352	ZMYM6	O95789	1325 aa		27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	FLT1	P17948	1338 aa		27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	CLRN2	A0PK11	232 aa		27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	NPM3	O75607	178 aa	Known RBP	27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	CACNB3	P54284	484 aa		27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	USP26	Q9BXU7	913 aa		27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	DDX4	Q9NQI0	724 aa	Known RBP	27.51	■■□□□ 1.99
ACACA-238	ENST00000616352	ASTN2	O75129	1339 aa	Predicted RBP	27.5	■■□□□ 1.99
ACACA-238	ENST00000616352	SIPA1L1	O43166	1804 aa		27.5	■■□□□ 1.99
ACACA-238	ENST00000616352	APP	P05067	770 aa		27.5	■■□□□ 1.99
ACACA-238	ENST00000616352	USP5	P45974	858 aa		27.5	■■□□□ 1.99
ACACA-238	ENST00000616352	FKBP1C	Q5VVH2	108 aa		27.5	■■□□□ 1.99
ACACA-238	ENST00000616352	USP50	Q70EL3	339 aa	Predicted RBP	27.5	■■□□□ 1.99
ACACA-238	ENST00000616352	FAM198A	Q9UFP1	575 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms