RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DCUN1D2Q6PH85 259 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 USP48Q86UV5 1035 aa14.12□□□□□ -0.15
TCF4-248ENST00000616053 MAGEB6P1A0A0J9YX57 407 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 SPOPO43791 374 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
TCF4-248ENST00000616053 TLDC2A0PJX2 215 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 TAF7Q15545 349 aaPredicted RBP14.11□□□□□ -0.15
TCF4-248ENST00000616053 CCDC157Q569K6 752 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 CEP128Q6ZU80 1094 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 IFNL2Q8IZJ0 200 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 NEDD9Q14511 834 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 SUPT20HQ8NEM7 779 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
TCF4-248ENST00000616053 ZBED9Q6R2W3 1325 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 RAD50Q92878 1312 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 NONOQ15233 471 aaKnown RBP eCLIP14.11□□□□□ -0.15
TCF4-248ENST00000616053 BMP15O95972 392 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 CDC37L1Q7L3B6 337 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 TMTC2Q8N394 836 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 DPYSL4O14531 572 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 EPB41P11171 864 aaKnown RBP14.11□□□□□ -0.15
TCF4-248ENST00000616053 ZNF165P49910 485 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
TCF4-248ENST00000616053 FYCO1Q9BQS8 1478 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 RTN1Q16799 776 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 MAEAQ7L5Y9 396 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 PPP4R1Q8TF05 950 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 FYB2Q5VWT5 728 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 DUSP27Q5VZP5 1158 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 MYLK4Q86YV6 388 aaPredicted RBP14.1□□□□□ -0.15
TCF4-248ENST00000616053 ORC3Q9UBD5 711 aaPredicted RBP14.1□□□□□ -0.15
TCF4-248ENST00000616053 TRIM50Q86XT4 487 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 ZSWIM4Q9H7M6 989 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 IPO11Q9UI26 975 aaKnown RBP14.1□□□□□ -0.15
TCF4-248ENST00000616053 PDZRN3Q9UPQ7 1066 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 IL1RL1Q01638 556 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 NKIRAS1Q9NYS0 192 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 JAG2Q9Y219 1238 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 ATF7P17544 494 aaPredicted RBP14.1□□□□□ -0.15
TCF4-248ENST00000616053 POLR2BP30876 1174 aaKnown RBP14.1□□□□□ -0.15
TCF4-248ENST00000616053 JADE1Q6IE81 842 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 DPP9Q86TI2 863 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 NEUROG2Q9H2A3 272 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 CCPG1Q9ULG6 757 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 AP5M1Q9H0R1 490 aa14.1□□□□□ -0.15
TCF4-248ENST00000616053 GNPATO15228 680 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 INTS8Q75QN2 995 aaKnown RBP14.09□□□□□ -0.15
TCF4-248ENST00000616053 GDAP1Q8TB36 358 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 PIDD1Q9HB75 910 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 CHRNA2Q15822 529 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 TTC6Q86TZ1 520 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 BBS5Q8N3I7 341 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 FTOQ9C0B1 505 aaKnown RBP eCLIP14.09□□□□□ -0.15
TCF4-248ENST00000616053 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 GNA11P29992 359 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 PGBD1Q96JS3 809 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 CASP2P42575 452 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 M0R2C6 588 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 ARPP19P56211 112 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 VCX3AQ9NNX9 186 aa14.09□□□□□ -0.15
TCF4-248ENST00000616053 NAIPQ13075 1403 aa14.08□□□□□ -0.15
TCF4-248ENST00000616053 EIF4E1BA6NMX2 242 aaKnown RBP14.08□□□□□ -0.15
TCF4-248ENST00000616053 CTAGE1Q96RT6 745 aa14.08□□□□□ -0.15
TCF4-248ENST00000616053 ELMOD1Q8N336 334 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 MTRQ99707 1265 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 ADPGKQ9BRR6 497 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 PHF8Q9UPP1 1060 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 PTK2BQ14289 1009 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 CNBD1Q8NA66 436 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 TTC1Q99614 292 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 ARHGEF35A5YM69 484 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 AS3MTQ9HBK9 375 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 SYTL2Q9HCH5 934 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 ST7Q9NRC1 585 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 APBA3O96018 575 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 IQCB1Q15051 598 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 BNIP3LO60238 219 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 Q3C1V9 767 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 GBP6Q6ZN66 633 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 AFAP1L1Q8TED9 768 aa14.08□□□□□ -0.16
TCF4-248ENST00000616053 SH2B1Q9NRF2 756 aaPredicted RBP14.08□□□□□ -0.16
TCF4-248ENST00000616053 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 CNGA4Q8IV77 575 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 DCLK2Q8N568 766 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 ANKRD2Q9GZV1 360 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 ZBTB43O43298 467 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 LGSNQ5TDP6 509 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 NUB1Q9Y5A7 615 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 MMS19Q96T76 1030 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 TEKT2Q9UIF3 430 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 SLC4A1P02730 911 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 MCM5P33992 734 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 RNF219Q5W0B1 726 aaPredicted RBP14.07□□□□□ -0.16
TCF4-248ENST00000616053 RSRC2Q7L4I2 434 aaKnown RBP14.07□□□□□ -0.16
TCF4-248ENST00000616053 DNAJC7Q99615 494 aa14.07□□□□□ -0.16
TCF4-248ENST00000616053 CPSF3Q9UKF6 684 aaKnown RBP14.07□□□□□ -0.16
TCF4-248ENST00000616053 ZNF18P17022 549 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms