RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 KLHL34Q8N239 644 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 MRFAP1L1Q96HT8 127 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 SREK1Q8WXA9 508 aaKnown RBP21.16■□□□□ 0.98
SPAST-203ENST00000615843 STMN2Q93045 179 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 MTUS1Q9ULD2 1270 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 ZNF174Q15697 407 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 BICC1Q9H694 974 aaKnown RBP21.16■□□□□ 0.98
SPAST-203ENST00000615843 JAK2O60674 1132 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 SLF1Q9BQI6 1058 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 ANTXR1Q9H6X2 564 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 C6orf50Q9HD87 102 aa21.16■□□□□ 0.98
SPAST-203ENST00000615843 PAK2Q13177 524 aa21.15■□□□□ 0.98
SPAST-203ENST00000615843 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
SPAST-203ENST00000615843 PPP1R2P41236 205 aa21.15■□□□□ 0.98
SPAST-203ENST00000615843 MYCBPQ99417 103 aaPredicted RBP21.15■□□□□ 0.98
SPAST-203ENST00000615843 GNAT2P19087 354 aa21.15■□□□□ 0.98
SPAST-203ENST00000615843 RNASE9P60153 205 aaKnown RBP21.15■□□□□ 0.98
SPAST-203ENST00000615843 TM6SF1Q9BZW5 370 aa21.15■□□□□ 0.98
SPAST-203ENST00000615843 PPIP5K1Q6PFW1 1433 aa21.15■□□□□ 0.98
SPAST-203ENST00000615843 ATP5DP30049 168 aa21.15■□□□□ 0.98
SPAST-203ENST00000615843 NOX5Q96PH1 765 aa21.15■□□□□ 0.98
SPAST-203ENST00000615843 NR1I2O75469 434 aa21.14■□□□□ 0.98
SPAST-203ENST00000615843 ATP6V0A2Q9Y487 856 aa21.14■□□□□ 0.98
SPAST-203ENST00000615843 GJC1P36383 396 aa21.14■□□□□ 0.98
SPAST-203ENST00000615843 GDAP1L1Q96MZ0 367 aa21.14■□□□□ 0.98
SPAST-203ENST00000615843 PAK1Q13153 545 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 WHAMMP3Q1A5X7 153 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 AKAP4Q5JQC9 854 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 CHAMP1Q96JM3 812 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 CAPN7Q9Y6W3 813 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 RAPGEF1Q13905 1077 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 ME3Q16798 604 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 BIVM-ERCC5R4GMW8 1640 aa21.14■□□□□ 0.97
SPAST-203ENST00000615843 SLC39A6Q13433 755 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 NUP58Q9BVL2 599 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 SAMM50Q9Y512 469 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 E7EVH7 732 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 ADKP55263 362 aaKnown RBP21.13■□□□□ 0.97
SPAST-203ENST00000615843 USP37Q86T82 979 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 RPGRIP1Q96KN7 1286 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 IBTKQ9P2D0 1353 aaPredicted RBP21.13■□□□□ 0.97
SPAST-203ENST00000615843 UHRF1BP1Q6BDS2 1440 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 NAP1L3Q99457 506 aaPredicted RBP21.13■□□□□ 0.97
SPAST-203ENST00000615843 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.13■□□□□ 0.97
SPAST-203ENST00000615843 POSTNQ15063 836 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 CACNA2D3Q8IZS8 1091 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 TAB2Q9NYJ8 693 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 MAPK8IP1Q9UQF2 711 aa21.13■□□□□ 0.97
SPAST-203ENST00000615843 PLCB3Q01970 1234 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 FERMT1Q9BQL6 677 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 KIAA1468Q9P260 1216 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 MTMR6Q9Y217 621 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 EEF2P13639 858 aaKnown RBP21.12■□□□□ 0.97
SPAST-203ENST00000615843 WDR66Q8TBY9 1149 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 IQSEC3Q9UPP2 1182 aaPredicted RBP21.12■□□□□ 0.97
SPAST-203ENST00000615843 A0A1W2PP64 1363 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 PNMA6EA0A0J9YXQ4 647 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 ACTN4O43707 911 aaKnown RBP21.12■□□□□ 0.97
SPAST-203ENST00000615843 GBP1P32455 592 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 GNGT1P63211 74 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 CCDC63Q8NA47 563 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 PPP2R2CQ9Y2T4 447 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 ZPR1O75312 459 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 SEL1L2Q5TEA6 688 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 CSGALNACT2Q8N6G5 542 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 PPP1R12CQ9BZL4 782 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 FEZ2Q9UHY8 353 aaPredicted RBP21.12■□□□□ 0.97
SPAST-203ENST00000615843 RIMS2Q9UQ26 1411 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 ATP6V1AP38606 617 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 WWC3Q9ULE0 1092 aa21.12■□□□□ 0.97
SPAST-203ENST00000615843 UTP11Q9Y3A2 253 aaKnown RBP21.12■□□□□ 0.97
SPAST-203ENST00000615843 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 TRMT44Q8IYL2 757 aaKnown RBP21.11■□□□□ 0.97
SPAST-203ENST00000615843 SSH2Q76I76 1423 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 DEXIO95424 95 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 DIS3L2Q8IYB7 885 aaKnown RBP21.11■□□□□ 0.97
SPAST-203ENST00000615843 BAIAP2L1Q9UHR4 511 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 SAR1BQ9Y6B6 198 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 PPFIA4O75335 1185 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 PDE4DQ08499 809 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 PSMB7Q99436 277 aa21.11■□□□□ 0.97
SPAST-203ENST00000615843 PLCD1P51178 756 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 TSNAXIP1Q2TAA8 658 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 VWA3BQ502W6 1294 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 PALD1Q9ULE6 856 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 MAGEB6P1A0A0J9YX57 407 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 TRAF5O00463 557 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 TMEM87BQ96K49 555 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 MAGEA1P43355 309 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 LIG3P49916 1009 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 ADALQ6DHV7 355 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 BICD1Q96G01 975 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 DESI2Q9BSY9 194 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 PSDA5PKW4 1024 aaPredicted RBP21.1■□□□□ 0.97
SPAST-203ENST00000615843 PPARDQ03181 441 aa21.1■□□□□ 0.97
SPAST-203ENST00000615843 RBM28Q9NW13 759 aaKnown RBP21.1■□□□□ 0.97
SPAST-203ENST00000615843 CCDC152Q4G0S7 254 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 CCDC51Q96ER9 411 aa21.09■□□□□ 0.97
SPAST-203ENST00000615843 ZKSCAN3Q9BRR0 538 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms