RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 VIRMAQ69YN4 1812 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 LRRC10BA6NIK2 292 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 LZTS3O60299 673 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 CPP00450 1065 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 RPN1P04843 607 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 XRCC5P13010 732 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 NOS2P35228 1153 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 MAP2K2P36507 400 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 USP5P45974 858 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 HNRNPH2P55795 449 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 NOLC1Q14978 699 aaKnown RBP eCLIP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 BRD3Q15059 726 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 AP1ARQ63HQ0 302 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 PACS1Q6VY07 963 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 NGDNQ8NEJ9 315 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SPIRE2Q8WWL2 714 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 MIEF2Q96C03 454 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 IWS1Q96ST2 819 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TGIF2Q9GZN2 237 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 UNC45AQ9H3U1 944 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 RABL2AQ9UBK7 228 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 USP25Q9UHP3 1055 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 DMGDHQ9UI17 866 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SLC45A1Q9Y2W3 748 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SOS1Q07889 1333 aaPredicted RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 MSTNO14793 375 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 RNASEH2AO75792 299 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 ADAMTS2O95450 1211 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 PSMA3P25788 255 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 CTAG1AP78358 180 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 MAP3K10Q02779 954 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 TAF11Q15544 211 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 FAM133BQ5BKY9 247 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 NAIF1Q69YI7 327 aaPredicted RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 CCBE1Q6UXH8 406 aaPredicted RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 LEKR1Q6ZMV7 388 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 KIAA1958Q8N8K9 716 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 GALNT6Q8NCL4 622 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 ERP27Q96DN0 273 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 MPHOSPH6Q99547 160 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 COMMD8Q9NX08 183 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 DDX41Q9UJV9 622 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 TTF2Q9UNY4 1162 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 PLEKHG2Q9H7P9 1386 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 KIAA1107Q9UPP5 1409 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 MAGEB6P1A0A0J9YX57 407 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 A0A1B0GUL7 405 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 KRT18P05783 430 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 RBP3P10745 1247 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 CBLBQ13191 982 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 SYCP1Q15431 976 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 LONRF1Q17RB8 773 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 PLA2G4EQ3MJ16 856 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 HHATQ5VTY9 493 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 GIGYF2Q6Y7W6 1299 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 VASH1Q7L8A9 365 aaPredicted RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 ARHGEF25Q86VW2 580 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 GOLGA6L1Q8N7Z2 621 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 ANKRD20A12PQ8NF67 263 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 UHMK1Q8TAS1 419 aaKnown RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 GPT2Q8TD30 523 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 BICD1Q96G01 975 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 NACA2Q9H009 215 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 SPATA7Q9P0W8 599 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 FBXO2Q9UK22 296 aaPredicted RBP3.53□□□□□ -1.84
CBWD3-209ENST00000614377 TMCC3Q9ULS5 477 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 CECR2Q9BXF3 1484 aa3.53□□□□□ -1.84
CBWD3-209ENST00000614377 SGSM2O43147 1006 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 KRT38O76015 456 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 SLURP2P0DP57 97 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 LMNB1P20700 586 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 ITGA6P23229 1130 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 SESN3P58005 492 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 FAM160A1Q05DH4 1040 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 SART3Q15020 963 aaKnown RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CLPPQ16740 277 aaPredicted RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 CCDC93Q567U6 631 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 MTHFD1LQ6UB35 978 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 LYPD4Q6UWN0 246 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 SV2AQ7L0J3 742 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 BPHLQ86WA6 291 aaPredicted RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 TRIM42Q8IWZ5 723 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 NANOS1Q8WY41 292 aaKnown RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 PANK3Q9H999 370 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 A1CFQ9NQ94 594 aaKnown RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 TOMM22Q9NS69 142 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 ATP8A1Q9Y2Q0 1164 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 MRPL42Q9Y6G3 142 aaKnown RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 A0A1W2PRQ8 180 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 TMCO5BA8MYB1 307 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 FAM25EA8MYX2 175 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 MYO1CO00159 1063 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 TCEA3O75764 348 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 BAG4O95429 457 aaKnown RBP3.52□□□□□ -1.85
CBWD3-209ENST00000614377 ZNF76P36508 570 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 PRPHP41219 470 aa3.52□□□□□ -1.85
CBWD3-209ENST00000614377 GJA8P48165 433 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms