RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 GUCY1B3Q02153 619 aa19.19■□□□□ 0.66
CNOT3-208ENST00000613073 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
CNOT3-208ENST00000613073 TBC1D10CQ8IV04 446 aa19.19■□□□□ 0.66
CNOT3-208ENST00000613073 STRBPQ96SI9 672 aaKnown RBP19.19■□□□□ 0.66
CNOT3-208ENST00000613073 ARMT1Q9H993 441 aa19.19■□□□□ 0.66
CNOT3-208ENST00000613073 INCENPQ9NQS7 918 aa19.19■□□□□ 0.66
CNOT3-208ENST00000613073 SMTNL1A8MU46 457 aa19.18■□□□□ 0.66
CNOT3-208ENST00000613073 MBD4O95243 580 aa19.18■□□□□ 0.66
CNOT3-208ENST00000613073 ZNF274Q96GC6 653 aaPredicted RBP19.18■□□□□ 0.66
CNOT3-208ENST00000613073 LLPHQ9BRT6 129 aaKnown RBP19.18■□□□□ 0.66
CNOT3-208ENST00000613073 TPD52L1Q16890 204 aaPredicted RBP19.18■□□□□ 0.66
CNOT3-208ENST00000613073 CELF1Q92879 486 aaKnown RBP19.18■□□□□ 0.66
CNOT3-208ENST00000613073 RTL9Q8NET4 1388 aa19.18■□□□□ 0.66
CNOT3-208ENST00000613073 KLF18A0A0U1RQI7 1052 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 ZPR1O75312 459 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 LRP2BPQ9P2M1 347 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 CICQ96RK0 1608 aaPredicted RBP19.17■□□□□ 0.66
CNOT3-208ENST00000613073 TPM3P06753 285 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 CEBPZQ03701 1054 aaKnown RBP19.17■□□□□ 0.66
CNOT3-208ENST00000613073 TRDNQ13061 729 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 SPATA32Q96LK8 384 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 SETDB2Q96T68 719 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 ABCF2Q9UG63 623 aa19.17■□□□□ 0.66
CNOT3-208ENST00000613073 RPS6KA4O75676 772 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 RESTQ13127 1097 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 CKAP2LQ8IYA6 745 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 ATRNO75882 1429 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 CCDC66A2RUB6 948 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 GOLGA8BA8MQT2 603 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 PRKAB2O43741 272 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 NBPF5PQ86XG9 351 aaPredicted RBP19.16■□□□□ 0.66
CNOT3-208ENST00000613073 KRT222Q8N1A0 295 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 STK11IPQ8N1F8 1099 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 TIGD1Q96MW7 591 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 BCORQ6W2J9 1755 aa19.16■□□□□ 0.66
CNOT3-208ENST00000613073 CCDC192P0DO97 292 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 SF3B3Q15393 1217 aaKnown RBP19.15■□□□□ 0.66
CNOT3-208ENST00000613073 MORC2Q9Y6X9 1032 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-208ENST00000613073 B4E1Z4 1266 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 KMT5BQ4FZB7 885 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 CYB5R4Q7L1T6 521 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 TRIM5Q9C035 493 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 EPB41L4AQ9HCS5 686 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-208ENST00000613073 TAOK2Q9UL54 1235 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 RTCBQ9Y3I0 505 aaKnown RBP19.15■□□□□ 0.66
CNOT3-208ENST00000613073 ARAP2Q8WZ64 1704 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 IFNL3Q8IZI9 196 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 MINPP1Q9UNW1 487 aa19.15■□□□□ 0.66
CNOT3-208ENST00000613073 BTAF1O14981 1849 aa19.14■□□□□ 0.66
CNOT3-208ENST00000613073 CTDSPL2Q05D32 466 aa19.14■□□□□ 0.65
CNOT3-208ENST00000613073 LCORLQ8N3X6 602 aa19.14■□□□□ 0.65
CNOT3-208ENST00000613073 LEO1Q8WVC0 666 aaPredicted RBP19.14■□□□□ 0.65
CNOT3-208ENST00000613073 ARHGEF1Q92888 912 aaKnown RBP19.14■□□□□ 0.65
CNOT3-208ENST00000613073 SCAND2PQ9GZW5 306 aaPredicted RBP19.14■□□□□ 0.65
CNOT3-208ENST00000613073 NAPBQ9H115 298 aa19.14■□□□□ 0.65
CNOT3-208ENST00000613073 BSDC1Q9NW68 430 aaPredicted RBP19.14■□□□□ 0.65
CNOT3-208ENST00000613073 PATL2C9JE40 543 aaKnown RBP19.14■□□□□ 0.65
CNOT3-208ENST00000613073 RXRAP19793 462 aa19.14■□□□□ 0.65
CNOT3-208ENST00000613073 GJD4Q96KN9 370 aaPredicted RBP19.14■□□□□ 0.65
CNOT3-208ENST00000613073 ZNF215Q9UL58 517 aaPredicted RBP19.14■□□□□ 0.65
CNOT3-208ENST00000613073 HPS5Q9UPZ3 1129 aa19.14■□□□□ 0.65
CNOT3-208ENST00000613073 GOLGA6L4A6NEF3 574 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 FDPSP14324 419 aaKnown RBP19.13■□□□□ 0.65
CNOT3-208ENST00000613073 LIG1P18858 919 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 RC3H1Q5TC82 1133 aaKnown RBP19.13■□□□□ 0.65
CNOT3-208ENST00000613073 VPS37DQ86XT2 251 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 FBXL16Q8N461 479 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 FTOQ9C0B1 505 aaKnown RBP eCLIP19.13■□□□□ 0.65
CNOT3-208ENST00000613073 NEDD4P46934 1319 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 SPATA31A6Q5VVP1 1343 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 SALL1Q9NSC2 1324 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 LAMB2P55268 1798 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 EVCP57679 992 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 OTUD7BQ6GQQ9 843 aa19.13■□□□□ 0.65
CNOT3-208ENST00000613073 FAM200AQ8TCP9 573 aa19.12■□□□□ 0.65
CNOT3-208ENST00000613073 NLRP3Q96P20 1036 aa19.12■□□□□ 0.65
CNOT3-208ENST00000613073 SENP2Q9HC62 589 aa19.12■□□□□ 0.65
CNOT3-208ENST00000613073 CARMIL3Q8ND23 1372 aa19.12■□□□□ 0.65
CNOT3-208ENST00000613073 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.12■□□□□ 0.65
CNOT3-208ENST00000613073 ZSCAN16Q9H4T2 348 aaPredicted RBP19.12■□□□□ 0.65
CNOT3-208ENST00000613073 RAI14Q9P0K7 980 aa19.12■□□□□ 0.65
CNOT3-208ENST00000613073 SLC4A4Q9Y6R1 1079 aa19.12■□□□□ 0.65
CNOT3-208ENST00000613073 GSG1L2A8MUP6 293 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 KLRK1P26718 216 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 ELF2Q15723 593 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 ADGRA1Q86SQ6 560 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 ELP1O95163 1332 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 CPLX1O14810 134 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 CAPN2P17655 700 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 CYP7A1P22680 504 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 TDO2P48775 406 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 NAA16Q6N069 864 aaPredicted RBP19.11■□□□□ 0.65
CNOT3-208ENST00000613073 CCDC144CPQ8IYA2 1237 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 NYXQ9GZU5 481 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 GJB4Q9NTQ9 266 aa19.11■□□□□ 0.65
CNOT3-208ENST00000613073 USP27XA6NNY8 438 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 RPS8P62241 208 aaKnown RBP19.1■□□□□ 0.65
CNOT3-208ENST00000613073 TYRO3Q06418 890 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms