RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SDR42E1Q8WUS8 393 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 ZNF512BQ96KM6 892 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 NAPBQ9H115 298 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 ABCF2Q9UG63 623 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 GSG1L2A8MUP6 293 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 UQCRFS1P1P0C7P4 283 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 KIF23Q02241 960 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 CCDC144BQ3MJ40 725 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 TMEM67Q5HYA8 995 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 FBXL16Q8N461 479 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 IGDCC4Q8TDY8 1250 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 ABCC12Q96J65 1359 aa16.42■□□□□ 0.22
PCDHGA3-202ENST00000612467 ZNF75DP51815 510 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 FAM160A1Q05DH4 1040 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 IQCB1Q15051 598 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 ERFEQ4G0M1 354 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 LY9Q9HBG7 655 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 FAM217BQ9NTX9 383 aaPredicted RBP16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 C4AP0C0L4 1744 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 C4BP0C0L5 1744 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 WDHD1O75717 1129 aaPredicted RBP16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 TPM2P07951 284 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 EVX2Q03828 476 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 TICAM2Q86XR7 235 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 SLC4A4Q9Y6R1 1079 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 MROH7-TTC4A0A0A0MT08 1334 aa16.41■□□□□ 0.22
PCDHGA3-202ENST00000612467 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 FMR1NBQ8N0W7 255 aaPredicted RBP16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 FAM13BQ9NYF5 915 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 ATRNO75882 1429 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 IFIT3O14879 490 aaKnown RBP16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 IGHMBP2P38935 993 aaKnown RBP16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 KRT40Q6A162 431 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 MRPS27Q92552 414 aaKnown RBP16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 SDF4Q9BRK5 362 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 LRP2BPQ9P2M1 347 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 ZMYM6O95789 1325 aa16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
PCDHGA3-202ENST00000612467 PATL2C9JE40 543 aaKnown RBP16.39■□□□□ 0.22
PCDHGA3-202ENST00000612467 SPTLC2O15270 562 aa16.39■□□□□ 0.22
PCDHGA3-202ENST00000612467 KLRK1P26718 216 aa16.39■□□□□ 0.22
PCDHGA3-202ENST00000612467 TDO2P48775 406 aa16.39■□□□□ 0.22
PCDHGA3-202ENST00000612467 CCDC152Q4G0S7 254 aa16.39■□□□□ 0.22
PCDHGA3-202ENST00000612467 JAG2Q9Y219 1238 aa16.39■□□□□ 0.22
PCDHGA3-202ENST00000612467 PLCH1Q4KWH8 1693 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 GOLGA8AA7E2F4 631 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 ZBTB43O43298 467 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 PLA2G4DQ86XP0 818 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 LINC00116Q8NCU8 138 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 KIAA1524Q8TCG1 905 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 SLC26A6Q9BXS9 759 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 CLIC6Q96NY7 704 aa16.39■□□□□ 0.21
PCDHGA3-202ENST00000612467 LRP5O75197 1615 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 MINDY4BA8MYZ0 360 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 NTRK3Q16288 839 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 SPECC1Q5M775 1068 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 DHX40Q8IX18 779 aaKnown RBP16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 AOPEPQ8N6M6 819 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 BCL11BQ9C0K0 894 aaPredicted RBP16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 WNK3Q9BYP7 1800 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 ADALQ6DHV7 355 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 KCNJ14Q9UNX9 436 aa16.38■□□□□ 0.21
PCDHGA3-202ENST00000612467 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 CYP7A1P22680 504 aa16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 STX1AQ16623 288 aa16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 SLC4A8Q2Y0W8 1093 aa16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 CLIP2Q9UDT6 1046 aa16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 HSP90AA2PQ14568 343 aaPredicted RBP16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 AXDND1Q5T1B0 1012 aaPredicted RBP16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
PCDHGA3-202ENST00000612467 PRDM1O75626 825 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 AKNAD1Q5T1N1 836 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 NUP133Q8WUM0 1156 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 RAI14Q9P0K7 980 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 SLC12A7Q9Y666 1083 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 COL1A1P02452 1464 aaPredicted RBP16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 EP400Q96L91 3159 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 PFKFB1P16118 471 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
PCDHGA3-202ENST00000612467 POLR3EQ9NVU0 708 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms