RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 LRRC2Q9BYS8 371 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 COPRSQ9NQ92 184 aa10.05□□□□□ -0.8
LINC00547-201ENST00000612438 MYBL2P10244 700 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 RBBP5Q15291 538 aaKnown RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 ZNF483Q8TF39 744 aaPredicted RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 ZNF396Q96N95 335 aaPredicted RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 SEC62Q99442 399 aaKnown RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 ORC3Q9UBD5 711 aaPredicted RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 ZNF609O15014 1411 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 NCAPD2Q15021 1401 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 RFX7Q2KHR2 1363 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 ARHGAP23Q9P227 1491 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 A0A087WWV3 80 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 OVOS2A0A0G2JMS6 1433 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 TBC1D8O95759 1140 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 GSDMDP57764 484 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 TNNI3KQ59H18 835 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 STOX1Q6ZVD7 989 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 DHX32Q7L7V1 743 aaKnown RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 CEP57L1Q8IYX8 460 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 FPGT-TNNI3KV9GXZ4 949 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 CCP110O43303 1012 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 SEC31AO94979 1220 aaKnown RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 CHGBP05060 677 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 GRIK3Q13003 919 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 GCKRQ14397 625 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 AOPEPQ8N6M6 819 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 FSIP1Q8NA03 581 aa10.04□□□□□ -0.8
LINC00547-201ENST00000612438 PRPF38AQ8NAV1 312 aaKnown RBP10.04□□□□□ -0.8
LINC00547-201ENST00000612438 NFAT5O94916 1531 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 TMCO5BA8MYB1 307 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 PSMD2Q13200 908 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 NAT10Q9H0A0 1025 aaKnown RBP10.03□□□□□ -0.8
LINC00547-201ENST00000612438 IMPACTQ9P2X3 320 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 MCM8Q9UJA3 840 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC00547-201ENST00000612438 NDUFB9Q9Y6M9 179 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 LTN1O94822 1766 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 NRDCO43847 1150 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 SASH3O75995 380 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 RFX5P48382 616 aaPredicted RBP10.03□□□□□ -0.8
LINC00547-201ENST00000612438 FOSBP53539 338 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 EXOSC10Q01780 885 aaKnown RBP10.03□□□□□ -0.8
LINC00547-201ENST00000612438 ICA1Q05084 483 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 TFCP2Q12800 502 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 THOC1Q96FV9 657 aaKnown RBP10.03□□□□□ -0.8
LINC00547-201ENST00000612438 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 HAUS7Q99871 368 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 AGXT2Q9BYV1 514 aa10.03□□□□□ -0.8
LINC00547-201ENST00000612438 ME1P48163 572 aa10.02□□□□□ -0.8
LINC00547-201ENST00000612438 APOBRQ0VD83 1088 aa10.02□□□□□ -0.8
LINC00547-201ENST00000612438 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.8
LINC00547-201ENST00000612438 PDCD2Q16342 344 aaPredicted RBP10.02□□□□□ -0.8
LINC00547-201ENST00000612438 CPLX2Q6PUV4 134 aaKnown RBP10.02□□□□□ -0.8
LINC00547-201ENST00000612438 LRRC31Q6UY01 552 aa10.02□□□□□ -0.8
LINC00547-201ENST00000612438 ILDR1Q86SU0 546 aaPredicted RBP10.02□□□□□ -0.8
LINC00547-201ENST00000612438 FMR1NBQ8N0W7 255 aaPredicted RBP10.02□□□□□ -0.8
LINC00547-201ENST00000612438 KCNH5Q8NCM2 988 aa10.02□□□□□ -0.8
LINC00547-201ENST00000612438 ARFGAP3Q9NP61 516 aa10.02□□□□□ -0.8
LINC00547-201ENST00000612438 PXDNQ92626 1479 aa10.02□□□□□ -0.8
LINC00547-201ENST00000612438 PTPN12Q05209 780 aaKnown RBP10.02□□□□□ -0.81
LINC00547-201ENST00000612438 SETDB1Q15047 1291 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 CCDC158Q5M9N0 1113 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 TRIM74Q86UV6 250 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 TRIM73Q86UV7 250 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 RPUSD2Q8IZ73 545 aaKnown RBP10.02□□□□□ -0.81
LINC00547-201ENST00000612438 KAT2BQ92831 832 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 VPS18Q9P253 973 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 SALL1Q9NSC2 1324 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 PPFIA4O75335 1185 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 GPTP24298 496 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 CC2D1AQ6P1N0 951 aaPredicted RBP10.02□□□□□ -0.81
LINC00547-201ENST00000612438 METTL22Q9BUU2 404 aaPredicted RBP10.02□□□□□ -0.81
LINC00547-201ENST00000612438 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.81
LINC00547-201ENST00000612438 PCDHA7Q9UN72 937 aa10.02□□□□□ -0.81
LINC00547-201ENST00000612438 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 TUBB4AP04350 444 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 CCNHP51946 323 aaPredicted RBP10.01□□□□□ -0.81
LINC00547-201ENST00000612438 CCDC93Q567U6 631 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 E4F1Q66K89 784 aaPredicted RBP10.01□□□□□ -0.81
LINC00547-201ENST00000612438 ADALQ6DHV7 355 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 RINLQ6ZS11 566 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 TSHZ1Q6ZSZ6 1077 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 MRPS27Q92552 414 aaKnown RBP10.01□□□□□ -0.81
LINC00547-201ENST00000612438 MYD88Q99836 296 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 DBNDD2Q9BQY9 259 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 DDR1Q08345 913 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 KCNV1Q6PIU1 500 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 KBTBD3Q8NAB2 608 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 CCDC97Q96F63 343 aaPredicted RBP10.01□□□□□ -0.81
LINC00547-201ENST00000612438 BAG1Q99933 345 aaPredicted RBP10.01□□□□□ -0.81
LINC00547-201ENST00000612438 BPIFA3Q9BQP9 254 aa10.01□□□□□ -0.81
LINC00547-201ENST00000612438 SDF4Q9BRK5 362 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms