RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
CDH1-213ENST00000612417 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
CDH1-213ENST00000612417 SERPINB2P05120 415 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 BCAMP50895 628 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 CCT2P78371 535 aaKnown RBP17.16■□□□□ 0.34
CDH1-213ENST00000612417 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
CDH1-213ENST00000612417 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 FBXO41Q8TF61 875 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 APPBP2Q92624 585 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
CDH1-213ENST00000612417 ST5P78524 1137 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 IMMTQ16891 758 aaKnown RBP17.16■□□□□ 0.34
CDH1-213ENST00000612417 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 PRR5LQ6MZQ0 368 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
CDH1-213ENST00000612417 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
CDH1-213ENST00000612417 WDR19Q8NEZ3 1342 aa17.15■□□□□ 0.34
CDH1-213ENST00000612417 ZNF165P49910 485 aa17.15■□□□□ 0.34
CDH1-213ENST00000612417 RBM10P98175 930 aaKnown RBP17.15■□□□□ 0.34
CDH1-213ENST00000612417 DNTTIP2Q5QJE6 756 aaKnown RBP17.15■□□□□ 0.34
CDH1-213ENST00000612417 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
CDH1-213ENST00000612417 USP28Q96RU2 1077 aa17.15■□□□□ 0.34
CDH1-213ENST00000612417 MYO5AQ9Y4I1 1855 aaKnown RBP17.15■□□□□ 0.34
CDH1-213ENST00000612417 IDH1O75874 414 aaKnown RBP17.14■□□□□ 0.33
CDH1-213ENST00000612417 TM4SF1P30408 202 aa17.14■□□□□ 0.33
CDH1-213ENST00000612417 ILDR1Q86SU0 546 aaPredicted RBP17.14■□□□□ 0.33
CDH1-213ENST00000612417 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDH1-213ENST00000612417 UBE4AQ14139 1066 aa17.14■□□□□ 0.33
CDH1-213ENST00000612417 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
CDH1-213ENST00000612417 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
CDH1-213ENST00000612417 SPC24Q8NBT2 197 aa17.14■□□□□ 0.33
CDH1-213ENST00000612417 RGS22Q8NE09 1264 aa17.14■□□□□ 0.33
CDH1-213ENST00000612417 PIH1D3Q9NQM4 214 aaKnown RBP17.14■□□□□ 0.33
CDH1-213ENST00000612417 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
CDH1-213ENST00000612417 FGAP02671 866 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 FDPSP14324 419 aaKnown RBP17.13■□□□□ 0.33
CDH1-213ENST00000612417 ZNF75DP51815 510 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 SNW1Q13573 536 aaKnown RBP17.13■□□□□ 0.33
CDH1-213ENST00000612417 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 MTERF4Q7Z6M4 381 aaKnown RBP17.13■□□□□ 0.33
CDH1-213ENST00000612417 VPS37DQ86XT2 251 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
CDH1-213ENST00000612417 ENGASEQ8NFI3 743 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
CDH1-213ENST00000612417 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 PYCARDQ9ULZ3 195 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
CDH1-213ENST00000612417 WTIPA6NIX2 430 aaPredicted RBP17.12■□□□□ 0.33
CDH1-213ENST00000612417 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
CDH1-213ENST00000612417 CDC25BP30305 580 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 SLC9C2Q5TAH2 1124 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 CCDC73Q6ZRK6 1079 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 COL23A1Q86Y22 540 aaPredicted RBP17.12■□□□□ 0.33
CDH1-213ENST00000612417 C17orf53Q8N3J3 647 aaPredicted RBP17.12■□□□□ 0.33
CDH1-213ENST00000612417 GNL3LQ9NVN8 582 aaKnown RBP17.12■□□□□ 0.33
CDH1-213ENST00000612417 GYG1P46976 350 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 CEBPZQ03701 1054 aaKnown RBP17.12■□□□□ 0.33
CDH1-213ENST00000612417 STX1AQ16623 288 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 SARM1Q6SZW1 724 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 FTOQ9C0B1 505 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDH1-213ENST00000612417 ANKRD2Q9GZV1 360 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 GOLPH3LQ9H4A5 285 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
CDH1-213ENST00000612417 IQSEC3Q9UPP2 1182 aaPredicted RBP17.12■□□□□ 0.33
CDH1-213ENST00000612417 DDR1Q08345 913 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 IQCB1Q15051 598 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
CDH1-213ENST00000612417 PRC1O43663 620 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 PTGS1P23219 599 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 GRAPQ13588 217 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 NCOA7Q8NI08 942 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 GRAPLQ8TC17 118 aaPredicted RBP17.11■□□□□ 0.33
CDH1-213ENST00000612417 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
CDH1-213ENST00000612417 HPS5Q9UPZ3 1129 aa17.11■□□□□ 0.33
CDH1-213ENST00000612417 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
CDH1-213ENST00000612417 GPAA1O43292 621 aa17.1■□□□□ 0.33
CDH1-213ENST00000612417 FOSBP53539 338 aa17.1■□□□□ 0.33
CDH1-213ENST00000612417 NLGN1Q8N2Q7 840 aa17.1■□□□□ 0.33
CDH1-213ENST00000612417 FAM13BQ9NYF5 915 aa17.1■□□□□ 0.33
CDH1-213ENST00000612417 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
CDH1-213ENST00000612417 A0A1W2PQ27 194 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 A0A1W2PQ64 194 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 A0A1W2PQD8 194 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 KINO60870 393 aaKnown RBP17.09■□□□□ 0.33
CDH1-213ENST00000612417 ADD2P35612 726 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 ANTXR2P58335 489 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 HAND2P61296 217 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 MAP3K12Q12852 859 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 ADALQ6DHV7 355 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 FBXO18Q8NFZ0 1043 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
CDH1-213ENST00000612417 ANKIB1Q9P2G1 1089 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
CDH1-213ENST00000612417 KLF18A0A0U1RQI7 1052 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms