RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 ZNF532Q9HCE3 1301 aa23.33■■□□□ 1.33
SRRM3-205ENST00000612155 SALL1Q9NSC2 1324 aa23.33■■□□□ 1.33
SRRM3-205ENST00000612155 VIL1P09327 827 aaKnown RBP23.33■■□□□ 1.32
SRRM3-205ENST00000612155 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.32
SRRM3-205ENST00000612155 FOXD4L5Q5VV16 416 aaPredicted RBP23.33■■□□□ 1.32
SRRM3-205ENST00000612155 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.32
SRRM3-205ENST00000612155 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.32
SRRM3-205ENST00000612155 TBC1D22AQ8WUA7 517 aa23.33■■□□□ 1.32
SRRM3-205ENST00000612155 FOXD4L4Q8WXT5 416 aaPredicted RBP23.33■■□□□ 1.32
SRRM3-205ENST00000612155 TTF2Q9UNY4 1162 aaKnown RBP23.33■■□□□ 1.32
SRRM3-205ENST00000612155 RFX7Q2KHR2 1363 aa23.32■■□□□ 1.32
SRRM3-205ENST00000612155 RPAP1Q9BWH6 1393 aaPredicted RBP23.32■■□□□ 1.32
SRRM3-205ENST00000612155 BRD1O95696 1058 aa23.32■■□□□ 1.32
SRRM3-205ENST00000612155 MCTP1Q6DN14 999 aa23.32■■□□□ 1.32
SRRM3-205ENST00000612155 TIAM2Q8IVF5 1701 aa23.32■■□□□ 1.32
SRRM3-205ENST00000612155 MIGA1Q8NAN2 632 aa23.32■■□□□ 1.32
SRRM3-205ENST00000612155 FSD2A1L4K1 749 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 RNF113AO15541 343 aaKnown RBP23.31■■□□□ 1.32
SRRM3-205ENST00000612155 ADD2P35612 726 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 IL27Q8NEV9 243 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 PSME4Q14997 1843 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 ADAMTSL1Q8N6G6 1762 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 MYH7P12883 1935 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 CYP7A1P22680 504 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 PUS7LQ9H0K6 701 aaKnown RBP23.31■■□□□ 1.32
SRRM3-205ENST00000612155 LIMCH1Q9UPQ0 1083 aa23.31■■□□□ 1.32
SRRM3-205ENST00000612155 TCRBV5S4A2TA0A5A2 114 aa23.3■■□□□ 1.32
SRRM3-205ENST00000612155 DDNO94850 711 aaPredicted RBP23.3■■□□□ 1.32
SRRM3-205ENST00000612155 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
SRRM3-205ENST00000612155 NAA16Q6N069 864 aaPredicted RBP23.3■■□□□ 1.32
SRRM3-205ENST00000612155 OSBP2Q969R2 916 aa23.3■■□□□ 1.32
SRRM3-205ENST00000612155 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.3■■□□□ 1.32
SRRM3-205ENST00000612155 PDRG1Q9NUG6 133 aa23.3■■□□□ 1.32
SRRM3-205ENST00000612155 LMBRD1Q9NUN5 540 aa23.3■■□□□ 1.32
SRRM3-205ENST00000612155 M0R2C6 588 aa23.29■■□□□ 1.32
SRRM3-205ENST00000612155 SPTY2D1Q68D10 685 aaPredicted RBP23.29■■□□□ 1.32
SRRM3-205ENST00000612155 BRPF3Q9ULD4 1205 aa23.29■■□□□ 1.32
SRRM3-205ENST00000612155 ZBTB22O15209 634 aa23.28■■□□□ 1.32
SRRM3-205ENST00000612155 GMPSP49915 693 aaPredicted RBP23.28■■□□□ 1.32
SRRM3-205ENST00000612155 ST3GAL1Q11201 340 aa23.28■■□□□ 1.32
SRRM3-205ENST00000612155 CYP46A1Q9Y6A2 500 aa23.28■■□□□ 1.32
SRRM3-205ENST00000612155 DTNBO60941 627 aa23.28■■□□□ 1.32
SRRM3-205ENST00000612155 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
SRRM3-205ENST00000612155 TNIP1Q15025 636 aa23.28■■□□□ 1.32
SRRM3-205ENST00000612155 GMLQ99445 158 aa23.28■■□□□ 1.32
SRRM3-205ENST00000612155 DYNLL1P63167 89 aaKnown RBP23.27■■□□□ 1.32
SRRM3-205ENST00000612155 SKOR2Q2VWA4 1001 aaPredicted RBP23.27■■□□□ 1.32
SRRM3-205ENST00000612155 MCMDC2Q4G0Z9 681 aa23.27■■□□□ 1.32
SRRM3-205ENST00000612155 ZMYM1Q5SVZ6 1142 aa23.27■■□□□ 1.32
SRRM3-205ENST00000612155 MYH2Q9UKX2 1941 aa23.27■■□□□ 1.31
SRRM3-205ENST00000612155 PTMSP20962 102 aa23.26■■□□□ 1.31
SRRM3-205ENST00000612155 RBM5P52756 815 aaKnown RBP eCLIP23.26■■□□□ 1.31
SRRM3-205ENST00000612155 AATFQ9NY61 560 aaKnown RBP eCLIP23.26■■□□□ 1.31
SRRM3-205ENST00000612155 MAST3O60307 1309 aa23.26■■□□□ 1.31
SRRM3-205ENST00000612155 TSGA10IPQ3SY00 556 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 DCAF8L1A6NGE4 600 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 GOLGA6L22H0YM25 854 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 EGFRP00533 1210 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 ZSCAN25Q6NSZ9 544 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 APPBP2Q92624 585 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 TCEANC2Q96MN5 208 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 ARMT1Q9H993 441 aa23.25■■□□□ 1.31
SRRM3-205ENST00000612155 UBE3CQ15386 1083 aa23.24■■□□□ 1.31
SRRM3-205ENST00000612155 RBM26Q5T8P6 1007 aaKnown RBP23.24■■□□□ 1.31
SRRM3-205ENST00000612155 ZFYP08048 801 aaPredicted RBP23.24■■□□□ 1.31
SRRM3-205ENST00000612155 CRKP46108 304 aa23.24■■□□□ 1.31
SRRM3-205ENST00000612155 FKBP1AP62942 108 aaKnown RBP23.24■■□□□ 1.31
SRRM3-205ENST00000612155 ME3Q16798 604 aa23.24■■□□□ 1.31
SRRM3-205ENST00000612155 LCORLQ8N3X6 602 aa23.24■■□□□ 1.31
SRRM3-205ENST00000612155 TPCN1Q9ULQ1 816 aa23.24■■□□□ 1.31
SRRM3-205ENST00000612155 DAGLAQ9Y4D2 1042 aa23.24■■□□□ 1.31
SRRM3-205ENST00000612155 MBD4O95243 580 aa23.23■■□□□ 1.31
SRRM3-205ENST00000612155 USP17L8P0C7I0 530 aa23.23■■□□□ 1.31
SRRM3-205ENST00000612155 KLHL40Q2TBA0 621 aa23.23■■□□□ 1.31
SRRM3-205ENST00000612155 GAS2L3Q86XJ1 694 aa23.23■■□□□ 1.31
SRRM3-205ENST00000612155 MICALL2Q8IY33 904 aa23.23■■□□□ 1.31
SRRM3-205ENST00000612155 GPC2Q8N158 579 aa23.23■■□□□ 1.31
SRRM3-205ENST00000612155 AGBL3Q8NEM8 1001 aa23.23■■□□□ 1.31
SRRM3-205ENST00000612155 MROH7-TTC4A0A0A0MT08 1334 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 MAST2Q6P0Q8 1798 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 PRPF40AO75400 957 aaKnown RBP23.22■■□□□ 1.31
SRRM3-205ENST00000612155 RPS6KB1P23443 525 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 BTDP43251 543 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 RNF20Q5VTR2 975 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 SAMD7Q7Z3H4 446 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 CCDC83Q8IWF9 413 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 CNOT7Q9UIV1 285 aaKnown RBP23.22■■□□□ 1.31
SRRM3-205ENST00000612155 SUGT1Q9Y2Z0 365 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 DDX49Q9Y6V7 483 aaKnown RBP23.22■■□□□ 1.31
SRRM3-205ENST00000612155 MYO3BQ8WXR4 1341 aa23.22■■□□□ 1.31
SRRM3-205ENST00000612155 GOLGA6L3A6NEY3 463 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 GPAA1O43292 621 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 PRKAB2O43741 272 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 XRCC6P12956 609 aaKnown RBP eCLIP23.21■■□□□ 1.31
SRRM3-205ENST00000612155 LRRFIP1Q32MZ4 808 aaKnown RBP23.21■■□□□ 1.31
SRRM3-205ENST00000612155 NECAB1Q8N987 351 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 TEKT1Q969V4 418 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 AIDAQ96BJ3 306 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 TCHHQ07283 1943 aa23.21■■□□□ 1.31
SRRM3-205ENST00000612155 EPS15P42566 896 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms