RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 RTN1Q16799 776 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 NUTM2AQ8IVF1 878 aaPredicted RBP10.95□□□□□ -0.66
TPM1-233ENST00000610733 HAUS7Q99871 368 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.95□□□□□ -0.66
TPM1-233ENST00000610733 CCP110O43303 1012 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 ITGA6P23229 1130 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 MAP3K12Q12852 859 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 DNAJC10Q8IXB1 793 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 AK7Q96M32 723 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 DEF6Q9H4E7 631 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 TBX22Q9Y458 520 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 NEXMIFQ5QGS0 1516 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 CARMIL3Q8ND23 1372 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 ZNF532Q9HCE3 1301 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 CAVIN2O95810 425 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 USP5P45974 858 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 NLRP5P59047 1200 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 ADALQ6DHV7 355 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 CCDC191Q8NCU4 936 aa10.95□□□□□ -0.66
TPM1-233ENST00000610733 CAPN2P17655 700 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 HSPA2P54652 639 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 CNPY4Q8N129 248 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 FBXO18Q8NFZ0 1043 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 SDR42E1Q8WUS8 393 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 ANGEL1Q9UNK9 670 aaKnown RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 A2ML1A8K2U0 1454 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 PRKAB2O43741 272 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 CYP7A1P22680 504 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 OAS2P29728 719 aaKnown RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 RNASE9P60153 205 aaKnown RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 LINC00301Q8NCQ3 95 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 ZCRB1Q8TBF4 217 aaKnown RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 CNKSR2Q8WXI2 1034 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 JADE2Q9NQC1 790 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 ZPR1O75312 459 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 ADAMTS2O95450 1211 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 CLCN6P51797 869 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 PTPROQ16827 1216 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 NAA16Q6N069 864 aaPredicted RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 PLA2G4DQ86XP0 818 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 RUFY1Q96T51 708 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 SENP2Q9HC62 589 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 SAMSN1Q9NSI8 373 aaKnown RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 MAGEC2Q9UBF1 373 aaPredicted RBP10.94□□□□□ -0.66
TPM1-233ENST00000610733 RCOR1Q9UKL0 485 aa10.94□□□□□ -0.66
TPM1-233ENST00000610733 KIF28PB7ZC32 967 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
TPM1-233ENST00000610733 KCNQ4P56696 695 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 IGSF22Q8N9C0 903 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 V9GY48 417 aaPredicted RBP10.93□□□□□ -0.66
TPM1-233ENST00000610733 WDHD1O75717 1129 aaPredicted RBP10.93□□□□□ -0.66
TPM1-233ENST00000610733 IDEP14735 1019 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 PHKA1P46020 1223 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 NLRP12P59046 1061 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 ETF1P62495 437 aaKnown RBP10.93□□□□□ -0.66
TPM1-233ENST00000610733 ARID5AQ03989 594 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 PLBD2Q8NHP8 589 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 MRFAP1L1Q96HT8 127 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 SLF1Q9BQI6 1058 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 FUCA2Q9BTY2 467 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 STX8Q9UNK0 236 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 ELP1O95163 1332 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 IRS4O14654 1257 aaPredicted RBP10.93□□□□□ -0.66
TPM1-233ENST00000610733 STARD3NLO95772 234 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 MTF1Q14872 753 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 KRI1Q8N9T8 703 aaKnown RBP10.93□□□□□ -0.66
TPM1-233ENST00000610733 TAB2Q9NYJ8 693 aa10.93□□□□□ -0.66
TPM1-233ENST00000610733 ZC3H13Q5T200 1668 aaKnown RBP10.93□□□□□ -0.66
TPM1-233ENST00000610733 H0YHG0 523 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 ENC1O14682 589 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 PHKG2P15735 406 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 DHX40Q8IX18 779 aaKnown RBP10.92□□□□□ -0.66
TPM1-233ENST00000610733 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 CYP2D7A0A087X1C5 515 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 CTDNEP1O95476 244 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 IQCB1Q15051 598 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 ARMCX5Q6P1M9 558 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 COPRSQ9NQ92 184 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 HELLSQ9NRZ9 838 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 DACH1Q9UI36 760 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 HECW2Q9P2P5 1572 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 SETBP1Q9Y6X0 1596 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 MACROD2A1Z1Q3 448 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 HOXB7P09629 217 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 GREM2Q9H772 168 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
TPM1-233ENST00000610733 NRXN1Q9ULB1 1477 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 APPBP2Q92624 585 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 DCAF5Q96JK2 942 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 WWC3Q9ULE0 1092 aa10.92□□□□□ -0.66
TPM1-233ENST00000610733 SOWAHDA6NJG2 315 aa10.91□□□□□ -0.66
TPM1-233ENST00000610733 TXLNAP40222 546 aa10.91□□□□□ -0.66
TPM1-233ENST00000610733 PPP2R2CQ9Y2T4 447 aa10.91□□□□□ -0.66
TPM1-233ENST00000610733 MYO1BO43795 1136 aa10.91□□□□□ -0.66
TPM1-233ENST00000610733 ERLIN1O75477 346 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms