RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 PDS5AQ29RF7 1337 aaKnown RBP14.2□□□□□ -0.14
LINC00539-204ENST00000608957 TRPA1O75762 1119 aa14.2□□□□□ -0.14
LINC00539-204ENST00000608957 LDHBP07195 334 aaKnown RBP14.2□□□□□ -0.14
LINC00539-204ENST00000608957 ARID4AP29374 1257 aaPredicted RBP14.2□□□□□ -0.14
LINC00539-204ENST00000608957 SUPT20HL1Q3ZLR7 823 aa14.2□□□□□ -0.14
LINC00539-204ENST00000608957 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
LINC00539-204ENST00000608957 CDC42EP5Q6NZY7 148 aa14.2□□□□□ -0.14
LINC00539-204ENST00000608957 SAGE1Q9NXZ1 904 aa14.2□□□□□ -0.14
LINC00539-204ENST00000608957 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
LINC00539-204ENST00000608957 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
LINC00539-204ENST00000608957 NOP58Q9Y2X3 529 aaKnown RBP14.2□□□□□ -0.14
LINC00539-204ENST00000608957 PPP1R12BO60237 982 aaPredicted RBP14.19□□□□□ -0.14
LINC00539-204ENST00000608957 MCAMP43121 646 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 TM4SF4P48230 202 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 NFIAQ12857 509 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 TNNI3KQ59H18 835 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 DBNDD2Q9BQY9 259 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 FPGT-TNNI3KV9GXZ4 949 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 FOCADQ5VW36 1801 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 RFX7Q2KHR2 1363 aa14.19□□□□□ -0.14
LINC00539-204ENST00000608957 RPAP1Q9BWH6 1393 aaPredicted RBP14.19□□□□□ -0.14
LINC00539-204ENST00000608957 GAKO14976 1311 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
LINC00539-204ENST00000608957 CAPN15O75808 1086 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 TNNI2P48788 182 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 FKBP1CQ5VVH2 108 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.18□□□□□ -0.14
LINC00539-204ENST00000608957 FAM83AQ86UY5 434 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 SLC10A4Q96EP9 437 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 GPR108Q9NPR9 543 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 FAM198AQ9UFP1 575 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 PCDHB15Q9Y5E8 787 aa14.18□□□□□ -0.14
LINC00539-204ENST00000608957 IREB2P48200 963 aaKnown RBP14.17□□□□□ -0.14
LINC00539-204ENST00000608957 TBC1D9Q6ZT07 1266 aa14.17□□□□□ -0.14
LINC00539-204ENST00000608957 CENPQQ7L2Z9 268 aaPredicted RBP14.17□□□□□ -0.14
LINC00539-204ENST00000608957 ZFPM1Q8IX07 1006 aa14.17□□□□□ -0.14
LINC00539-204ENST00000608957 SIRT2Q8IXJ6 389 aa14.17□□□□□ -0.14
LINC00539-204ENST00000608957 SPATA5Q8NB90 893 aa14.17□□□□□ -0.14
LINC00539-204ENST00000608957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.17□□□□□ -0.14
LINC00539-204ENST00000608957 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
LINC00539-204ENST00000608957 TLR7Q9NYK1 1049 aaKnown RBP14.17□□□□□ -0.14
LINC00539-204ENST00000608957 ABCF2Q9UG63 623 aa14.17□□□□□ -0.14
LINC00539-204ENST00000608957 SIPA1L1O43166 1804 aa14.17□□□□□ -0.14
LINC00539-204ENST00000608957 PHIPQ8WWQ0 1821 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 UNCXA6NJT0 531 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 MECOMQ03112 1051 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 TCP10Q12799 353 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 OS9Q13438 667 aaPredicted RBP14.16□□□□□ -0.14
LINC00539-204ENST00000608957 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
LINC00539-204ENST00000608957 ANKRD13AQ8IZ07 590 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
LINC00539-204ENST00000608957 R3HDMLQ9H3Y0 253 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 ELP3Q9H9T3 547 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 USP40Q9NVE5 1235 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 TMOD2Q9NZR1 351 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 EXOC6BQ9Y2D4 811 aa14.16□□□□□ -0.14
LINC00539-204ENST00000608957 PTPRFP10586 1907 aa14.15□□□□□ -0.14
LINC00539-204ENST00000608957 TBC1D8O95759 1140 aa14.15□□□□□ -0.14
LINC00539-204ENST00000608957 ZBTB48P10074 688 aaPredicted RBP14.15□□□□□ -0.14
LINC00539-204ENST00000608957 VGLL4Q14135 290 aa14.15□□□□□ -0.14
LINC00539-204ENST00000608957 GORABQ5T7V8 394 aa14.15□□□□□ -0.14
LINC00539-204ENST00000608957 FAM151AQ8WW52 585 aa14.15□□□□□ -0.14
LINC00539-204ENST00000608957 EAF2Q96CJ1 260 aaPredicted RBP14.15□□□□□ -0.14
LINC00539-204ENST00000608957 FAM163AQ96GL9 167 aaPredicted RBP14.15□□□□□ -0.14
LINC00539-204ENST00000608957 CCDC8Q9H0W5 538 aaPredicted RBP14.15□□□□□ -0.14
LINC00539-204ENST00000608957 DDX4Q9NQI0 724 aaKnown RBP14.15□□□□□ -0.14
LINC00539-204ENST00000608957 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
LINC00539-204ENST00000608957 DBNLQ9UJU6 430 aaKnown RBP14.15□□□□□ -0.14
LINC00539-204ENST00000608957 ATAD5Q96QE3 1844 aa14.15□□□□□ -0.14
LINC00539-204ENST00000608957 MROH7-TTC4A0A0A0MT08 1334 aa14.15□□□□□ -0.15
LINC00539-204ENST00000608957 ATRNL1Q5VV63 1379 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 IGF2BP3O00425 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC00539-204ENST00000608957 UQCRFS1P1P0C7P4 283 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 BTDP43251 543 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 RHBDL3P58872 404 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 MAP3K9P80192 1104 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 ERICH6Q7L0X2 663 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 SH3BP5LQ7L8J4 393 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 DZIP1Q86YF9 867 aaKnown RBP14.14□□□□□ -0.15
LINC00539-204ENST00000608957 NSUN4Q96CB9 384 aaKnown RBP14.14□□□□□ -0.15
LINC00539-204ENST00000608957 OPTNQ96CV9 577 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 MCOLN1Q9GZU1 580 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 DOCK1Q14185 1865 aa14.14□□□□□ -0.15
LINC00539-204ENST00000608957 MANSC4A6NHS7 340 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-204ENST00000608957 WDHD1O75717 1129 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-204ENST00000608957 IGHDP01880 384 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 CYP2E1P05181 493 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-204ENST00000608957 SLURP2P0DP57 97 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 SREBF2Q12772 1141 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 HDAC1Q13547 482 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-204ENST00000608957 TTC39AQ5SRH9 613 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 SPTY2D1Q68D10 685 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-204ENST00000608957 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 ZKSCAN4Q969J2 545 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-204ENST00000608957 ABHD8Q96I13 439 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 MS4A4AQ96JQ5 239 aa14.13□□□□□ -0.15
LINC00539-204ENST00000608957 PTPN18Q99952 460 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms