RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 VWA3AA6NCI4 1184 aa14.36□□□□□ -0.11
MSH6-212ENST00000607272 ABCB7O75027 752 aa14.36□□□□□ -0.11
MSH6-212ENST00000607272 CDKL5O76039 1030 aa14.36□□□□□ -0.11
MSH6-212ENST00000607272 HAND2P61296 217 aa14.36□□□□□ -0.11
MSH6-212ENST00000607272 WASHC4Q2M389 1173 aa14.36□□□□□ -0.11
MSH6-212ENST00000607272 UBXN6Q9BZV1 441 aa14.36□□□□□ -0.11
MSH6-212ENST00000607272 AFDNP55196 1824 aaKnown RBP14.36□□□□□ -0.11
MSH6-212ENST00000607272 STX10O60499 249 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 CASQ1P31415 396 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
MSH6-212ENST00000607272 MAP3K9P80192 1104 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 FKBP4Q02790 459 aaKnown RBP eCLIP14.35□□□□□ -0.11
MSH6-212ENST00000607272 RESP18Q5W5W9 173 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 CCDC102BQ68D86 513 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 SHC4Q6S5L8 630 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
MSH6-212ENST00000607272 DCAF5Q96JK2 942 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 GJB4Q9NTQ9 266 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 CWC25Q9NXE8 425 aaPredicted RBP14.35□□□□□ -0.11
MSH6-212ENST00000607272 TULP2O00295 520 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 ZNF213O14771 459 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 FANCGO15287 622 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 FOXP2O15409 715 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 ANTXR2P58335 489 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 PNOCQ13519 176 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 VPS37DQ86XT2 251 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 TMEM139Q8IV31 216 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 TXLNBQ8N3L3 684 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 BAG1Q99933 345 aaPredicted RBP14.35□□□□□ -0.11
MSH6-212ENST00000607272 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.35□□□□□ -0.11
MSH6-212ENST00000607272 FANCLQ9NW38 375 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 CEP126Q9P2H0 1117 aa14.35□□□□□ -0.11
MSH6-212ENST00000607272 HOOK1Q9UJC3 728 aaKnown RBP14.35□□□□□ -0.11
MSH6-212ENST00000607272 SCN11AQ9UI33 1791 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 CUTAO60888 179 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 HNRNPH2P55795 449 aaKnown RBP14.34□□□□□ -0.11
MSH6-212ENST00000607272 GPS2Q13227 327 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 GNL2Q13823 731 aaKnown RBP14.34□□□□□ -0.11
MSH6-212ENST00000607272 PTPAQ15257 358 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 LRRC24Q50LG9 513 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 CC2D1AQ6P1N0 951 aaPredicted RBP14.34□□□□□ -0.11
MSH6-212ENST00000607272 CPLX2Q6PUV4 134 aaKnown RBP14.34□□□□□ -0.11
MSH6-212ENST00000607272 ALG1Q9BT22 464 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 ZMYM6O95789 1325 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 GNG11P61952 73 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 TRDNQ13061 729 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 TBX2Q13207 712 aaPredicted RBP14.34□□□□□ -0.11
MSH6-212ENST00000607272 APPBP2Q92624 585 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
MSH6-212ENST00000607272 TSPYL1Q9H0U9 437 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 NLRP2Q9NX02 1062 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 KIF13AQ9H1H9 1805 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 CPDO75976 1380 aa14.34□□□□□ -0.11
MSH6-212ENST00000607272 ARFGEF2Q9Y6D5 1785 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 POLR3GO15318 223 aaPredicted RBP14.33□□□□□ -0.12
MSH6-212ENST00000607272 TBC1D8O95759 1140 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 CDK11BP21127 795 aaKnown RBP14.33□□□□□ -0.12
MSH6-212ENST00000607272 SLC20A2Q08357 652 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 TTC39AQ5SRH9 613 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 JAKMIP3Q5VZ66 844 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 KRT40Q6A162 431 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 KRBA2Q6ZNG9 492 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 CNNM3Q8NE01 707 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 RABGGTAQ92696 567 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 KCNH3Q9ULD8 1083 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 ANGEL1Q9UNK9 670 aaKnown RBP14.33□□□□□ -0.12
MSH6-212ENST00000607272 AKAP2Q9Y2D5 859 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 MRFAP1Q9Y605 127 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 STK24Q9Y6E0 443 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 TMEM232C9JQI7 657 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 CAPN15O75808 1086 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 SEC31AO94979 1220 aaKnown RBP14.33□□□□□ -0.12
MSH6-212ENST00000607272 PPP2R3AQ06190 1150 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 RSRC2Q7L4I2 434 aaKnown RBP14.33□□□□□ -0.12
MSH6-212ENST00000607272 METTL16Q86W50 562 aaKnown RBP14.33□□□□□ -0.12
MSH6-212ENST00000607272 MAP3K14Q99558 947 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 PCDHA5Q9Y5H7 936 aa14.33□□□□□ -0.12
MSH6-212ENST00000607272 METAP2P50579 478 aaKnown RBP eCLIP14.32□□□□□ -0.12
MSH6-212ENST00000607272 SMC1AQ14683 1233 aaKnown RBP14.32□□□□□ -0.12
MSH6-212ENST00000607272 LONRF3Q496Y0 759 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 SPECC1LQ69YQ0 1117 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 RAB11FIP4Q86YS3 637 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 CCDC191Q8NCU4 936 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 WDR24Q96S15 920 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 ORAI2Q96SN7 254 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 INTS13Q9NVM9 706 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
MSH6-212ENST00000607272 PLEKHG2Q9H7P9 1386 aa14.31□□□□□ -0.12
MSH6-212ENST00000607272 FOXP4Q8IVH2 680 aaPredicted RBP14.31□□□□□ -0.12
MSH6-212ENST00000607272 FAM177A1Q8N128 213 aaPredicted RBP14.31□□□□□ -0.12
MSH6-212ENST00000607272 ZNF594Q96JF6 807 aaPredicted RBP14.31□□□□□ -0.12
MSH6-212ENST00000607272 DACH1Q9UI36 760 aa14.31□□□□□ -0.12
MSH6-212ENST00000607272 ABCC12Q96J65 1359 aa14.31□□□□□ -0.12
MSH6-212ENST00000607272 MAP3K15Q6ZN16 1313 aa14.31□□□□□ -0.12
MSH6-212ENST00000607272 SASH3O75995 380 aa14.31□□□□□ -0.12
MSH6-212ENST00000607272 GTF2E1P29083 439 aaPredicted RBP14.31□□□□□ -0.12
MSH6-212ENST00000607272 GOLGA8FQ08AF8 430 aa14.31□□□□□ -0.12
MSH6-212ENST00000607272 GOLGA8DPQ0D2H9 430 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms