RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	CAPZA3	Q96KX2	299 aa		11.25	□□□□□ -0.61
PAX6-231	ENST00000606377	FAM227B	Q96M60	508 aa		11.25	□□□□□ -0.61
PAX6-231	ENST00000606377	CTNND2	Q9UQB3	1225 aa		11.25	□□□□□ -0.61
PAX6-231	ENST00000606377	TCP10	Q12799	353 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	LARGE2	Q8N3Y3	721 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	CCDC42	Q96M95	316 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	FER	P16591	822 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	RAPGEF1	Q13905	1077 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	DNAJC10	Q8IXB1	793 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	CCDC65	Q8IXS2	484 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	SMC5	Q8IY18	1101 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	CTAGE9	A4FU28	777 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	KRT83	P78385	493 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	KIF5A	Q12840	1032 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	LMBR1	Q8WVP7	490 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	NAP1L4	Q99733	375 aa	Known RBP	11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	IFNK	Q9P0W0	207 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	PBRM1	Q86U86	1689 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	PLCB3	Q01970	1234 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	KARS	Q15046	597 aa	Known RBP	11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	BABAM1	Q9NWV8	329 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	ARHGEF12	Q9NZN5	1544 aa		11.24	□□□□□ -0.61
PAX6-231	ENST00000606377	ARL1	P40616	181 aa	Predicted RBP	11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	FRMD4B	Q9Y2L6	1034 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377		V9GY48	417 aa	Predicted RBP	11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	DEXI	O95424	95 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	SEC24B	O95487	1268 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	MYCL	P12524	364 aa	Predicted RBP	11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	KRT5	P13647	590 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	WDR66	Q8TBY9	1149 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	APPBP2	Q92624	585 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	TMEM87B	Q96K49	555 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	NCOA5	Q9HCD5	579 aa	Known RBP	11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	GUCA1B	Q9UMX6	200 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	APBA3	O96018	575 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	SPATA5	Q8NB90	893 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	DDX12P	Q92771	950 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	LPIN2	Q92539	896 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	UIMC1	Q96RL1	719 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	TRIM35	Q9UPQ4	493 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	CEP83	Q9Y592	693 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	CCDC169	A6NNP5	214 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	MAST3	O60307	1309 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	DDX39A	O00148	427 aa	Known RBP	11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	TAF12	Q16514	161 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	ELP1	O95163	1332 aa		11.23	□□□□□ -0.61
PAX6-231	ENST00000606377	KRT86	O43790	486 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	LZTFL1	Q9NQ48	299 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	SLAIN2	Q9P270	581 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	USH1G	Q495M9	461 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	IQCG	Q9H095	443 aa	Known RBP	11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	INTS4	Q96HW7	963 aa	Known RBP	11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	ARHGEF10	O15013	1369 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	GRIPAP1	Q4V328	841 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	SPECC1L	Q69YQ0	1117 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	MYL10	Q9BUA6	226 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	PZP	P20742	1482 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	PNMA6E	A0A0J9YXQ4	647 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	TRAF5	O00463	557 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	CHL1	O00533	1208 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	EPB41	P11171	864 aa	Known RBP	11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	TXK	P42681	527 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	GCKR	Q14397	625 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	MAEA	Q7L5Y9	396 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	TGFBRAP1	Q8WUH2	860 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	CEP63	Q96MT8	703 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	SNX14	Q9Y5W7	946 aa		11.22	□□□□□ -0.61
PAX6-231	ENST00000606377	MROH5	Q6ZUA9	1318 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	RPL13	P26373	211 aa	Known RBP	11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	BMS1	Q14692	1282 aa	Known RBP	11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	MAPKAPK5	Q8IW41	473 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	HOXB7	P09629	217 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	ZAP70	P43403	619 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	PLCD1	P51178	756 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	PDE4D	Q08499	809 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	BIRC3	Q13489	604 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	SREK1	Q8WXA9	508 aa	Known RBP	11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	FNBP1	Q96RU3	617 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	ANGEL1	Q9UNK9	670 aa	Known RBP	11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	ZNF532	Q9HCE3	1301 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	NCAPH2	Q6IBW4	605 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	MSANTD4	Q8NCY6	345 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	ZBTB9	Q96C00	473 aa		11.21	□□□□□ -0.61
PAX6-231	ENST00000606377	ATP2C2	O75185	946 aa		11.21	□□□□□ -0.62
PAX6-231	ENST00000606377	MSL1	Q68DK7	614 aa		11.21	□□□□□ -0.62
PAX6-231	ENST00000606377	ZNF569	Q5MCW4	686 aa		11.21	□□□□□ -0.62
PAX6-231	ENST00000606377	GTPBP4	Q9BZE4	634 aa	Known RBP	11.21	□□□□□ -0.62
PAX6-231	ENST00000606377	SERPINA10	Q9UK55	444 aa		11.21	□□□□□ -0.62
PAX6-231	ENST00000606377	ZNF496	Q96IT1	587 aa	Predicted RBP	11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	TRERF1	Q96PN7	1200 aa		11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	PER1	O15534	1290 aa	Predicted RBP	11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	WDR44	Q5JSH3	913 aa		11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	CCDC63	Q8NA47	563 aa		11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	ZFP91	Q96JP5	570 aa	Predicted RBP	11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	PRIMPOL	Q96LW4	560 aa		11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	NOC4L	Q9BVI4	516 aa	Known RBP	11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	MAPK8IP1	Q9UQF2	711 aa		11.2	□□□□□ -0.62
PAX6-231	ENST00000606377	RILPL1	Q5EBL4	403 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms