RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 SLC4A4Q9Y6R1 1079 aa15.09■□□□□ 0.01
HERPUD2-207ENST00000603731 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
HERPUD2-207ENST00000603731 LAMA4Q16363 1823 aa15.08■□□□□ 0.01
HERPUD2-207ENST00000603731 CASTP20810 708 aaKnown RBP15.08■□□□□ 0
HERPUD2-207ENST00000603731 SLC4A3P48751 1232 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 MCM2P49736 904 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 MLLT1Q03111 559 aaPredicted RBP15.08■□□□□ 0
HERPUD2-207ENST00000603731 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 TM6SF1Q9BZW5 370 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 NAPBQ9H115 298 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 VPS33BQ9H267 617 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 SUGT1Q9Y2Z0 365 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 CYP46A1Q9Y6A2 500 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 SNED1Q8TER0 1413 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 FER1L6Q2WGJ9 1857 aa15.08■□□□□ 0
HERPUD2-207ENST00000603731 ZNF213O14771 459 aa15.07■□□□□ 0
HERPUD2-207ENST00000603731 BAG3O95817 575 aa15.07■□□□□ 0
HERPUD2-207ENST00000603731 FGAP02671 866 aa15.07■□□□□ 0
HERPUD2-207ENST00000603731 CYP21A2P08686 494 aa15.07■□□□□ 0
HERPUD2-207ENST00000603731 DYNLL1P63167 89 aaKnown RBP15.07■□□□□ 0
HERPUD2-207ENST00000603731 ALX1Q15699 326 aa15.07■□□□□ 0
HERPUD2-207ENST00000603731 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
HERPUD2-207ENST00000603731 ADGRA1Q86SQ6 560 aa15.07■□□□□ 0
HERPUD2-207ENST00000603731 UPF3BQ9BZI7 483 aaKnown RBP15.07■□□□□ 0
HERPUD2-207ENST00000603731 PSME4Q14997 1843 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 K7ELQ4 463 aaPredicted RBP15.06■□□□□ 0
HERPUD2-207ENST00000603731 TDO2P48775 406 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 CTCFP49711 727 aaPredicted RBP15.06■□□□□ 0
HERPUD2-207ENST00000603731 ADCK5Q3MIX3 580 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 CERS3Q8IU89 383 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 IFNL3Q8IZI9 196 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 LARGE2Q8N3Y3 721 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 ZNF384Q8TF68 577 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 NEK1Q96PY6 1258 aa15.06■□□□□ 0
HERPUD2-207ENST00000603731 RIOK1Q9BRS2 568 aaKnown RBP15.06■□□□□ 0
HERPUD2-207ENST00000603731 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
HERPUD2-207ENST00000603731 AATFQ9NY61 560 aaKnown RBP eCLIP15.06■□□□□ 0
HERPUD2-207ENST00000603731 SCN9AQ15858 1988 aa15.05■□□□□ 0
HERPUD2-207ENST00000603731 USP17L3A6NCW0 530 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 USP17L4A6NCW7 530 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 FOXP2O15409 715 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 HSP90AA1P07900 732 aaKnown RBP15.05■□□□□ -0
HERPUD2-207ENST00000603731 FKBP1AP62942 108 aaKnown RBP15.05■□□□□ -0
HERPUD2-207ENST00000603731 GRIK5Q16478 980 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 STRIP1Q5VSL9 837 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 RUFY3Q7L099 469 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 USP17L1Q7RTZ2 530 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 ZSWIM6Q9HCJ5 1215 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 ZNF277Q9NRM2 450 aaPredicted RBP15.05■□□□□ -0
HERPUD2-207ENST00000603731 PDRG1Q9NUG6 133 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 MROH7-TTC4A0A0A0MT08 1334 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 ZMYM6O95789 1325 aa15.05■□□□□ -0
HERPUD2-207ENST00000603731 BAZ2AQ9UIF9 1905 aaKnown RBP15.05■□□□□ -0
HERPUD2-207ENST00000603731 GSG1L2A8MUP6 293 aa15.04■□□□□ -0
HERPUD2-207ENST00000603731 PRKAB2O43741 272 aa15.04■□□□□ -0
HERPUD2-207ENST00000603731 HMGB1P09429 215 aaKnown RBP15.04■□□□□ -0
HERPUD2-207ENST00000603731 VEGFAP15692 232 aaPredicted RBP15.04■□□□□ -0
HERPUD2-207ENST00000603731 HAND2P61296 217 aa15.04■□□□□ -0
HERPUD2-207ENST00000603731 DIXDC1Q155Q3 683 aa15.04■□□□□ -0
HERPUD2-207ENST00000603731 NIM1KQ8IY84 436 aa15.04■□□□□ -0
HERPUD2-207ENST00000603731 TAOK3Q9H2K8 898 aa15.04■□□□□ -0
HERPUD2-207ENST00000603731 TTF2Q9UNY4 1162 aaKnown RBP15.04■□□□□ -0
HERPUD2-207ENST00000603731 E7EWF7 191 aa15.03■□□□□ -0
HERPUD2-207ENST00000603731 F8W031 263 aaPredicted RBP15.03■□□□□ -0
HERPUD2-207ENST00000603731 CD2BP2O95400 341 aaKnown RBP15.03■□□□□ -0
HERPUD2-207ENST00000603731 PLCG2P16885 1265 aa15.03■□□□□ -0
HERPUD2-207ENST00000603731 IARSP41252 1262 aaKnown RBP15.03■□□□□ -0
HERPUD2-207ENST00000603731 SDR42E1Q8WUS8 393 aa15.03■□□□□ -0
HERPUD2-207ENST00000603731 EPB41L4AQ9HCS5 686 aaPredicted RBP15.03■□□□□ -0
HERPUD2-207ENST00000603731 TNRC18O15417 2968 aaPredicted RBP15.03■□□□□ -0
HERPUD2-207ENST00000603731 NAV1Q8NEY1 1877 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 CDK5RAP2Q96SN8 1893 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 ZNF646O15015 1829 aaPredicted RBP15.02■□□□□ -0
HERPUD2-207ENST00000603731 CPA1P15085 419 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 RPS6KB1P23443 525 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 BTDP43251 543 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 USP5P45974 858 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 RGS19P49795 217 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 LBX1P52954 281 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 PPP4CP60510 307 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 TRDNQ13061 729 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 GIMAP6Q6P9H5 292 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 NOL8Q76FK4 1167 aaKnown RBP15.02■□□□□ -0
HERPUD2-207ENST00000603731 RALYLQ86SE5 291 aaKnown RBP15.02■□□□□ -0
HERPUD2-207ENST00000603731 CERS5Q8N5B7 392 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 FAM163AQ96GL9 167 aaPredicted RBP15.02■□□□□ -0
HERPUD2-207ENST00000603731 MXD3Q9BW11 206 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 CREBZFQ9NS37 354 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 TAF6LQ9Y6J9 622 aa15.02■□□□□ -0
HERPUD2-207ENST00000603731 LAMB1P07942 1786 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 GPR75-ASB3A0A0A6YYF3 556 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 AK2P54819 239 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 FGD1P98174 961 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 ANKRD1Q15327 319 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 DACT2Q5SW24 774 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 STOX1Q6ZVD7 989 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 SPRYD3Q8NCJ5 442 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 NCOA7Q8NI08 942 aa15.01□□□□□ -0.01
HERPUD2-207ENST00000603731 TTC14Q96N46 770 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms