RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 IER5LQ5T953 404 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 TICAM2Q86XR7 235 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 SHISA4Q96DD7 197 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 CSRNP1Q96S65 589 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 TANGO6Q9C0B7 1094 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 LNPKQ9C0E8 428 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 OCEL1Q9H607 264 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 NLRC5Q86WI3 1866 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 FDX1P10109 184 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 SERPINB4P48594 390 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 GNL2Q13823 731 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 CNGB1Q14028 1251 aaPredicted RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 TSNAXIP1Q2TAA8 658 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 C6orf132Q5T0Z8 1188 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 EGFLAMQ63HQ2 1017 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 SDE2Q6IQ49 451 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 PPARGC1BQ86YN6 1023 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 NLRP7Q8WX94 980 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 FMNL2Q96PY5 1086 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 NAP1L2Q9ULW6 460 aaPredicted RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 RIPOR2Q9Y4F9 1068 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 EMILIN1Q9Y6C2 1016 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MYH2Q9UKX2 1941 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 FANCMQ8IYD8 2048 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 NBPF26B4DH59 902 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 IGBP1P78318 339 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 SREBF2Q12772 1141 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 SAFB2Q14151 953 aaKnown RBP eCLIP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 SNX17Q15036 470 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 RALBP1Q15311 655 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 ERFEQ4G0M1 354 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 NBPF10Q6P3W6 841 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 ANKRD23Q86SG2 305 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 RGL4Q8IZJ4 473 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 GPR101Q96P66 508 aaPredicted RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 SRP68Q9UHB9 627 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MYBBP1AQ9BQG0 1328 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 PATJQ8NI35 1801 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 USP17L5A8MUK1 530 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 ZBTB7BO15156 539 aaPredicted RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 IBSPP21815 317 aaPredicted RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MAPK1P28482 360 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MOGSQ13724 837 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MSL1Q68DK7 614 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 IL17REQ8NFR9 667 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 RBM17Q96I25 401 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 PHF12Q96QT6 1004 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MYH15Q9Y2K3 1946 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MANSC4A6NHS7 340 aaPredicted RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 YDJCA8MPS7 323 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 HAX1O00165 279 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 HOXA2O43364 376 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 ZPR1O75312 459 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 POTEIP0CG38 1075 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 POTEJP0CG39 1038 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 COL6A1P12109 1028 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 CABP4P57796 275 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 TRIM50Q86XT4 487 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 LARGE2Q8N3Y3 721 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 DDX54Q8TDD1 881 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 TINF2Q9BSI4 451 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MYH16Q9H6N6 1097 aa3.7□□□□□ -1.82
VCAM1-205ENST00000603679 MKRN1Q9UHC7 482 aaKnown RBP3.7□□□□□ -1.82
VCAM1-205ENST00000603679 COL4A2P08572 1712 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 C19orf67A6NJJ6 358 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 DDX11L8A8MPP1 907 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 ABCC4O15439 1325 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 C21orf2O43822 256 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 PTMAP06454 111 aaKnown RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 SKIP12755 728 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 GCGRP47871 477 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 CASP7P55210 303 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 GRAPQ13588 217 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 DNAJC10Q8IXB1 793 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 GRAPLQ8TC17 118 aaPredicted RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 MICAL1Q8TDZ2 1067 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 GDF15Q99988 308 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 BACH2Q9BYV9 841 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 DDNO94850 711 aaPredicted RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 RAD51AP2Q09MP3 1159 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 MAP7D1Q3KQU3 841 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 ANKRD13DQ6ZTN6 518 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 CNBD1Q8NA66 436 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 KCNB2Q92953 911 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 PANK3Q9H999 370 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 PAK6Q9NQU5 681 aaPredicted RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 SUGT1Q9Y2Z0 365 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 PPME1Q9Y570 386 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 KIF26AQ9ULI4 1882 aaPredicted RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 LOC102724159A0A0B4J2E5 919 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 POTEB2H3BUK9 544 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 SNRPA1P09661 255 aaKnown RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 ATP1A2P50993 1020 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 IRX5P78411 483 aaPredicted RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 PWP2Q15269 919 aaKnown RBP3.69□□□□□ -1.82
VCAM1-205ENST00000603679 HSP90AB3PQ58FF7 597 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 MPRIPQ6WCQ1 1025 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 NGEFQ8N5V2 710 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 GPATCH11Q8N954 259 aa3.69□□□□□ -1.82
VCAM1-205ENST00000603679 LRRN4Q8WUT4 740 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms