RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 MICALL1Q8N3F8 863 aa17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 ZSWIM4Q9H7M6 989 aa17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 KIF2AO00139 706 aaPredicted RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 H2AFXP16104 143 aaPredicted RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 IBSPP21815 317 aaPredicted RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 LSG1Q9H089 658 aaKnown RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 PLEKHA4Q9H4M7 779 aa17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 PHACTR2O75167 634 aa17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 SLC9C2Q5TAH2 1124 aa17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 FAM208AQ9UK61 1670 aaKnown RBP17.7■□□□□ 0.42
PPFIA3-206ENST00000602655 A0A087WWV3 80 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 NEMFO60524 1076 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 ARFGAP3Q9NP61 516 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 SMC2O95347 1197 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 CREB3L3Q68CJ9 461 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 SPATA32Q96LK8 384 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 FAM53CQ9NYF3 392 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 TRPC5Q9UL62 973 aaPredicted RBP17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 UTYO14607 1347 aa17.69■□□□□ 0.42
PPFIA3-206ENST00000602655 LARGE1O95461 756 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 ACTN2P35609 894 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 DNAJC21Q5F1R6 531 aaKnown RBP17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 TMEM87AQ8NBN3 555 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 ANKRD20A12PQ8NF67 263 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 CXorf56Q9H5V9 222 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 INCENPQ9NQS7 918 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 LMO7Q8WWI1 1683 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 MAP2K2P36507 400 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 LRRC4BQ9NT99 713 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 ZNF652Q9Y2D9 606 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 EIF3CLB5ME19 914 aaKnown RBP17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 EVCP57679 992 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 TRAPPC3LQ5T215 181 aa17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 EIF3CQ99613 913 aaKnown RBP17.68■□□□□ 0.42
PPFIA3-206ENST00000602655 APBA3O96018 575 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 TTC6Q86TZ1 520 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 ATP2B1P20020 1258 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 IVLP07476 585 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 MAGEA9P43362 315 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 ANKIB1Q9P2G1 1089 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 LIMCH1Q9UPQ0 1083 aa17.67■□□□□ 0.42
PPFIA3-206ENST00000602655 ATP5JP18859 108 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 RAI14Q9P0K7 980 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 CYP46A1Q9Y6A2 500 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 BARGINQ6ZT62 677 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 COL15A1P39059 1388 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 TCHHQ07283 1943 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 RXRAP19793 462 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
PPFIA3-206ENST00000602655 MCAMP43121 646 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 CCDC102BQ68D86 513 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 BLOC1S2Q6QNY1 142 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 KRT27Q7Z3Y8 459 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 HSPA4P34932 840 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 FOXR1Q6PIV2 292 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 OSBP2Q969R2 916 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 PUS7LQ9H0K6 701 aaKnown RBP17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 SUFUQ9UMX1 484 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 C5P01031 1676 aa17.65■□□□□ 0.42
PPFIA3-206ENST00000602655 SLC27A2O14975 620 aa17.64■□□□□ 0.42
PPFIA3-206ENST00000602655 KLRK1P26718 216 aa17.64■□□□□ 0.42
PPFIA3-206ENST00000602655 GUCY1B3Q02153 619 aa17.64■□□□□ 0.42
PPFIA3-206ENST00000602655 ISM2Q6H9L7 571 aa17.64■□□□□ 0.42
PPFIA3-206ENST00000602655 FNBP4Q8N3X1 1017 aaPredicted RBP17.64■□□□□ 0.42
PPFIA3-206ENST00000602655 CCDC102AQ96A19 550 aa17.64■□□□□ 0.42
PPFIA3-206ENST00000602655 PHLPP1O60346 1717 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 SFPQP23246 707 aaKnown RBP eCLIP17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 ZNF34Q8IZ26 560 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 NLRP3Q96P20 1036 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 PDE8BO95263 885 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 CHRNDQ07001 517 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 MCMDC2Q4G0Z9 681 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 TMC6Q7Z403 805 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 DENND2AQ9ULE3 1009 aa17.64■□□□□ 0.41
PPFIA3-206ENST00000602655 BCCIPQ9P287 314 aaKnown RBP eCLIP17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 M0R2C6 588 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 ANAPC15P60006 121 aa17.63■□□□□ 0.41
PPFIA3-206ENST00000602655 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms