RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 FAM193AP78312 1265 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 CEP135Q66GS9 1140 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
ZNF558-207ENST00000601372 PATL2C9JE40 543 aaKnown RBP12.68□□□□□ -0.38
ZNF558-207ENST00000601372 PTGS1P23219 599 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 AOPEPQ8N6M6 819 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 INTS4Q96HW7 963 aaKnown RBP12.68□□□□□ -0.38
ZNF558-207ENST00000601372 ZKSCAN3Q9BRR0 538 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 URI1O94763 535 aaPredicted RBP12.68□□□□□ -0.38
ZNF558-207ENST00000601372 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 ZNF804BA4D1E1 1349 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 XDHP47989 1333 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 CCDC171Q6TFL3 1326 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
ZNF558-207ENST00000601372 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 BCAMP50895 628 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 SMARCC2Q8TAQ2 1214 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
ZNF558-207ENST00000601372 ACBD3Q9H3P7 528 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 RTN1Q16799 776 aa12.68□□□□□ -0.38
ZNF558-207ENST00000601372 COL15A1P39059 1388 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 ZBTB43O43298 467 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 RAD17O75943 681 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.67□□□□□ -0.38
ZNF558-207ENST00000601372 MASTLQ96GX5 879 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 EZH2Q15910 746 aaKnown RBP12.67□□□□□ -0.38
ZNF558-207ENST00000601372 KIF18AQ8NI77 898 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 RAB34Q9BZG1 259 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 ZAP70P43403 619 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 TNFAIP1Q13829 316 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 SYCP1Q15431 976 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 DEF6Q9H4E7 631 aa12.67□□□□□ -0.38
ZNF558-207ENST00000601372 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 UBA5Q9GZZ9 404 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 GPCPD1Q9NPB8 672 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 SMIM5Q71RC9 77 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
ZNF558-207ENST00000601372 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 GAS2L3Q86XJ1 694 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 RRP36Q96EU6 259 aaKnown RBP12.66□□□□□ -0.38
ZNF558-207ENST00000601372 DYNC1I1O14576 645 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 EPB41L2O43491 1005 aaKnown RBP12.66□□□□□ -0.38
ZNF558-207ENST00000601372 NAPAP54920 295 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 NLRP10Q86W26 655 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 PTPDC1A2A3K4 754 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 TRAF1Q13077 416 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 ZBTB9Q96C00 473 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 ALG1Q9BT22 464 aa12.66□□□□□ -0.38
ZNF558-207ENST00000601372 CA8P35219 290 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 LRRC24Q50LG9 513 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 SOS2Q07890 1332 aaPredicted RBP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 PPLO60437 1756 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 B4DLN1 442 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 SGSM2O43147 1006 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 PRC1O43663 620 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 BBOX1O75936 387 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 MRPL12P52815 198 aaKnown RBP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 ABT1Q9ULW3 272 aaKnown RBP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 KIF13AQ9H1H9 1805 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 TECPR2O15040 1411 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 HLFQ16534 295 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 UBXN4Q92575 508 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 V9GYY5 206 aaPredicted RBP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 CLRN2A0PK11 232 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 EDC3Q96F86 508 aaKnown RBP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
ZNF558-207ENST00000601372 GADL1Q6ZQY3 521 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 CDC37L1Q7L3B6 337 aa12.65□□□□□ -0.38
ZNF558-207ENST00000601372 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
ZNF558-207ENST00000601372 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 GNAQP50148 359 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 PTH1RQ03431 593 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 NARFQ9UHQ1 456 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 BEND3Q5T5X7 828 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 NCOA5Q9HCD5 579 aaKnown RBP12.64□□□□□ -0.39
ZNF558-207ENST00000601372 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 ZHX1Q9UKY1 873 aaPredicted RBP12.64□□□□□ -0.39
ZNF558-207ENST00000601372 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
ZNF558-207ENST00000601372 SYKP43405 635 aa12.64□□□□□ -0.39
ZNF558-207ENST00000601372 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms