RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 LCORLQ8N3X6 602 aa24.59■■□□□ 1.53
PNKP-215ENST00000600910 L3MBTL3Q96JM7 780 aaPredicted RBP24.59■■□□□ 1.53
PNKP-215ENST00000600910 ARMT1Q9H993 441 aa24.59■■□□□ 1.53
PNKP-215ENST00000600910 LMOD1P29536 600 aaPredicted RBP24.58■■□□□ 1.53
PNKP-215ENST00000600910 EPS15P42566 896 aa24.58■■□□□ 1.53
PNKP-215ENST00000600910 DLGAP5Q15398 846 aa24.58■■□□□ 1.53
PNKP-215ENST00000600910 CCDC171Q6TFL3 1326 aa24.58■■□□□ 1.52
PNKP-215ENST00000600910 PPP4CP60510 307 aa24.57■■□□□ 1.52
PNKP-215ENST00000600910 SAMD7Q7Z3H4 446 aa24.57■■□□□ 1.52
PNKP-215ENST00000600910 MTMR14Q8NCE2 650 aa24.57■■□□□ 1.52
PNKP-215ENST00000600910 SPDYE2BA6NHP3 402 aa24.57■■□□□ 1.52
PNKP-215ENST00000600910 EGFRP00533 1210 aa24.57■■□□□ 1.52
PNKP-215ENST00000600910 SPDYE6P0CI01 402 aa24.57■■□□□ 1.52
PNKP-215ENST00000600910 RBM26Q5T8P6 1007 aaKnown RBP24.57■■□□□ 1.52
PNKP-215ENST00000600910 PRMT6Q96LA8 375 aaPredicted RBP24.57■■□□□ 1.52
PNKP-215ENST00000600910 STRBPQ96SI9 672 aaKnown RBP24.57■■□□□ 1.52
PNKP-215ENST00000600910 TBC1D10BQ4KMP7 808 aaPredicted RBP24.56■■□□□ 1.52
PNKP-215ENST00000600910 SH3RF3Q8TEJ3 882 aaPredicted RBP24.56■■□□□ 1.52
PNKP-215ENST00000600910 MFAP1P55081 439 aaKnown RBP24.55■■□□□ 1.52
PNKP-215ENST00000600910 RHBDL3P58872 404 aa24.55■■□□□ 1.52
PNKP-215ENST00000600910 CERS3Q8IU89 383 aa24.55■■□□□ 1.52
PNKP-215ENST00000600910 WNT10BO00744 389 aa24.54■■□□□ 1.52
PNKP-215ENST00000600910 PLCG2P16885 1265 aa24.54■■□□□ 1.52
PNKP-215ENST00000600910 KIF4BQ2VIQ3 1234 aa24.54■■□□□ 1.52
PNKP-215ENST00000600910 CDC42EP5Q6NZY7 148 aa24.54■■□□□ 1.52
PNKP-215ENST00000600910 ZBED3Q96IU2 234 aaPredicted RBP24.54■■□□□ 1.52
PNKP-215ENST00000600910 USP40Q9NVE5 1235 aa24.54■■□□□ 1.52
PNKP-215ENST00000600910 WDR90Q96KV7 1748 aa24.54■■□□□ 1.52
PNKP-215ENST00000600910 NBPF9Q3BBW0 867 aa24.53■■□□□ 1.52
PNKP-215ENST00000600910 TDRD3Q9H7E2 651 aaKnown RBP24.53■■□□□ 1.52
PNKP-215ENST00000600910 ADARB2Q9NS39 739 aaKnown RBP24.53■■□□□ 1.52
PNKP-215ENST00000600910 HACL1Q9UJ83 578 aa24.53■■□□□ 1.52
PNKP-215ENST00000600910 VPS53Q5VIR6 699 aa24.53■■□□□ 1.52
PNKP-215ENST00000600910 TRPM4Q8TD43 1214 aa24.53■■□□□ 1.52
PNKP-215ENST00000600910 CRNKL1Q9BZJ0 848 aaKnown RBP24.53■■□□□ 1.52
PNKP-215ENST00000600910 SLC4A4Q9Y6R1 1079 aa24.53■■□□□ 1.52
PNKP-215ENST00000600910 PRKAB2O43741 272 aa24.52■■□□□ 1.52
PNKP-215ENST00000600910 TEX11Q8IYF3 940 aa24.52■■□□□ 1.52
PNKP-215ENST00000600910 ANO2Q9NQ90 1003 aa24.52■■□□□ 1.52
PNKP-215ENST00000600910 SCN4AP35499 1836 aa24.51■■□□□ 1.51
PNKP-215ENST00000600910 GNAT2P19087 354 aa24.51■■□□□ 1.51
PNKP-215ENST00000600910 SDR42E1Q8WUS8 393 aa24.51■■□□□ 1.51
PNKP-215ENST00000600910 IQCA1LA6NCM1 817 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 POTECB2RU33 542 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 MYO1BO43795 1136 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 SEC24BO95487 1268 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 HSPD1P10809 573 aaKnown RBP24.5■■□□□ 1.51
PNKP-215ENST00000600910 KIAA1211Q6ZU35 1233 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 ECM29Q5VYK3 1845 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 CLRN2A0PK11 232 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 FOXP2O15409 715 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 REC8O95072 547 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 EPHX2P34913 555 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 CACNB3P54284 484 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 PTH1RQ03431 593 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 TGFBRAP1Q8WUH2 860 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 BACH2Q9BYV9 841 aa24.5■■□□□ 1.51
PNKP-215ENST00000600910 CDK5RAP2Q96SN8 1893 aa24.49■■□□□ 1.51
PNKP-215ENST00000600910 GSG1L2A8MUP6 293 aa24.49■■□□□ 1.51
PNKP-215ENST00000600910 PATL2C9JE40 543 aaKnown RBP24.49■■□□□ 1.51
PNKP-215ENST00000600910 APPP05067 770 aa24.49■■□□□ 1.51
PNKP-215ENST00000600910 USP5P45974 858 aa24.49■■□□□ 1.51
PNKP-215ENST00000600910 HIRAP54198 1017 aaPredicted RBP24.49■■□□□ 1.51
PNKP-215ENST00000600910 SPDYE2Q495Y8 402 aa24.49■■□□□ 1.51
PNKP-215ENST00000600910 LSG1Q9H089 658 aaKnown RBP24.49■■□□□ 1.51
PNKP-215ENST00000600910 ZNF70Q9UC06 446 aaPredicted RBP24.49■■□□□ 1.51
PNKP-215ENST00000600910 WDHD1O75717 1129 aaPredicted RBP24.48■■□□□ 1.51
PNKP-215ENST00000600910 ZNF526Q8TF50 670 aaPredicted RBP24.48■■□□□ 1.51
PNKP-215ENST00000600910 DSCC1Q9BVC3 393 aa24.48■■□□□ 1.51
PNKP-215ENST00000600910 TAF1DQ9H5J8 278 aaPredicted RBP24.48■■□□□ 1.51
PNKP-215ENST00000600910 NFIAQ12857 509 aa24.47■■□□□ 1.51
PNKP-215ENST00000600910 TMOD2Q9NZR1 351 aa24.47■■□□□ 1.51
PNKP-215ENST00000600910 ASTN2O75129 1339 aaPredicted RBP24.47■■□□□ 1.51
PNKP-215ENST00000600910 EIF5BO60841 1220 aaKnown RBP24.46■■□□□ 1.51
PNKP-215ENST00000600910 PICALMQ13492 652 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 USP50Q70EL3 339 aaPredicted RBP24.46■■□□□ 1.51
PNKP-215ENST00000600910 MAPKAPK5Q8IW41 473 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 RRAGCQ9HB90 399 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 VEZTQ9HBM0 779 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 EPB41L4AQ9HCS5 686 aaPredicted RBP24.46■■□□□ 1.51
PNKP-215ENST00000600910 DDX4Q9NQI0 724 aaKnown RBP24.46■■□□□ 1.51
PNKP-215ENST00000600910 ATP8A2Q9NTI2 1148 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 RPAP1Q9BWH6 1393 aaPredicted RBP24.46■■□□□ 1.51
PNKP-215ENST00000600910 FOCADQ5VW36 1801 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 IFNL3Q8IZI9 196 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 IDI2Q9BXS1 227 aa24.46■■□□□ 1.51
PNKP-215ENST00000600910 DCP1AQ9NPI6 582 aaPredicted RBP24.46■■□□□ 1.51
PNKP-215ENST00000600910 FLT1P17948 1338 aa24.45■■□□□ 1.51
PNKP-215ENST00000600910 MAP4K1Q92918 833 aa24.45■■□□□ 1.5
PNKP-215ENST00000600910 NACAP1Q9BZK3 213 aa24.45■■□□□ 1.5
PNKP-215ENST00000600910 FAM198AQ9UFP1 575 aa24.45■■□□□ 1.5
PNKP-215ENST00000600910 MKRN1Q9UHC7 482 aaKnown RBP24.45■■□□□ 1.5
PNKP-215ENST00000600910 TCP10L2B9ZVM9 353 aa24.44■■□□□ 1.5
PNKP-215ENST00000600910 VEGFAP15692 232 aaPredicted RBP24.44■■□□□ 1.5
PNKP-215ENST00000600910 DDRGK1Q96HY6 314 aa24.44■■□□□ 1.5
PNKP-215ENST00000600910 FGAP02671 866 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 TDO2P48775 406 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 TCP10Q12799 353 aa24.43■■□□□ 1.5
PNKP-215ENST00000600910 ANGEL2Q5VTE6 544 aaKnown RBP24.43■■□□□ 1.5
PNKP-215ENST00000600910 GIMAP6Q6P9H5 292 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms