RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 DIS3LQ8TF46 1054 aaKnown RBP12.62□□□□□ -0.39
HIF3A-219ENST00000600879 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
HIF3A-219ENST00000600879 ZMYND8Q9ULU4 1186 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-219ENST00000600879 ADGRA2Q96PE1 1338 aa12.62□□□□□ -0.39
HIF3A-219ENST00000600879 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-219ENST00000600879 TFRCP02786 760 aaKnown RBP12.61□□□□□ -0.39
HIF3A-219ENST00000600879 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
HIF3A-219ENST00000600879 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
HIF3A-219ENST00000600879 VPS37DQ86XT2 251 aa12.61□□□□□ -0.39
HIF3A-219ENST00000600879 DEFB118Q96PH6 123 aa12.61□□□□□ -0.39
HIF3A-219ENST00000600879 SGPL1O95470 568 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 INHAP05111 366 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 SYN1P17600 705 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 HOXD10P28358 340 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 UBXN2AP68543 259 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 MOGSQ13724 837 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 C7orf61Q8IZ16 206 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 TEKT1Q969V4 418 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 PAWRQ96IZ0 340 aaKnown RBP12.6□□□□□ -0.39
HIF3A-219ENST00000600879 COL25A1Q9BXS0 654 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-219ENST00000600879 PRKRIP1Q9H875 184 aaPredicted RBP12.6□□□□□ -0.39
HIF3A-219ENST00000600879 ZCCHC17Q9NP64 241 aaKnown RBP12.6□□□□□ -0.39
HIF3A-219ENST00000600879 TMOD2Q9NZR1 351 aa12.6□□□□□ -0.39
HIF3A-219ENST00000600879 CUL9Q8IWT3 2517 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 GRM8O00222 908 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 ADCY3O60266 1144 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 PPATQ06203 517 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 TCP10Q12799 353 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 ANKRD23Q86SG2 305 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
HIF3A-219ENST00000600879 FLT3LGP49771 235 aa12.58□□□□□ -0.4
HIF3A-219ENST00000600879 FCGRTP55899 365 aa12.58□□□□□ -0.4
HIF3A-219ENST00000600879 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
HIF3A-219ENST00000600879 GPAT2Q6NUI2 795 aa12.58□□□□□ -0.4
HIF3A-219ENST00000600879 C9orf78Q9NZ63 289 aaPredicted RBP12.58□□□□□ -0.4
HIF3A-219ENST00000600879 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
HIF3A-219ENST00000600879 A0A1W2PPC1 479 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 ANP32CO43423 234 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 SLURP2P0DP57 97 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 BCRP11274 1271 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 BCAMP50895 628 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 APOBEC3HQ6NTF7 200 aaKnown RBP12.57□□□□□ -0.4
HIF3A-219ENST00000600879 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 FAM83AQ86UY5 434 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 SLAIN1Q8ND83 568 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 SUCLG2Q96I99 432 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 ZDHHC15Q96MV8 337 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-219ENST00000600879 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
HIF3A-219ENST00000600879 UNC80Q8N2C7 3258 aa12.57□□□□□ -0.4
HIF3A-219ENST00000600879 VAMP4O75379 141 aa12.56□□□□□ -0.4
HIF3A-219ENST00000600879 HDLBPQ00341 1268 aaKnown RBP12.56□□□□□ -0.4
HIF3A-219ENST00000600879 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
HIF3A-219ENST00000600879 LRRC24Q50LG9 513 aa12.56□□□□□ -0.4
HIF3A-219ENST00000600879 METTL24Q5JXM2 366 aa12.56□□□□□ -0.4
HIF3A-219ENST00000600879 TBC1D22AQ8WUA7 517 aa12.56□□□□□ -0.4
HIF3A-219ENST00000600879 HOOK2Q96ED9 719 aa12.56□□□□□ -0.4
HIF3A-219ENST00000600879 GDF15Q99988 308 aa12.56□□□□□ -0.4
HIF3A-219ENST00000600879 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.56□□□□□ -0.4
HIF3A-219ENST00000600879 NFIAQ12857 509 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 CCDC184Q52MB2 194 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 GADL1Q6ZQY3 521 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 ZFPM1Q8IX07 1006 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 PARK7Q99497 189 aaKnown RBP12.55□□□□□ -0.4
HIF3A-219ENST00000600879 MTMR10Q9NXD2 777 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 KCNH4Q9UQ05 1017 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 STXBP5LQ9Y2K9 1186 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 MROH5Q6ZUA9 1318 aa12.55□□□□□ -0.4
HIF3A-219ENST00000600879 ALPK3Q96L96 1907 aa12.54□□□□□ -0.4
HIF3A-219ENST00000600879 TNPO2O14787 897 aaKnown RBP12.54□□□□□ -0.4
HIF3A-219ENST00000600879 MAGEA10P43363 369 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-219ENST00000600879 TRIM32Q13049 653 aa12.54□□□□□ -0.4
HIF3A-219ENST00000600879 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
HIF3A-219ENST00000600879 CCDC84Q86UT8 332 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-219ENST00000600879 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
HIF3A-219ENST00000600879 KAZALD1Q96I82 304 aa12.54□□□□□ -0.4
HIF3A-219ENST00000600879 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
HIF3A-219ENST00000600879 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-219ENST00000600879 NBPF7P0C2Y1 421 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-219ENST00000600879 DIXDC1Q155Q3 683 aa12.53□□□□□ -0.4
HIF3A-219ENST00000600879 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
HIF3A-219ENST00000600879 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
HIF3A-219ENST00000600879 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
HIF3A-219ENST00000600879 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
HIF3A-219ENST00000600879 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
HIF3A-219ENST00000600879 PAK6Q9NQU5 681 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-219ENST00000600879 MAST3O60307 1309 aa12.53□□□□□ -0.4
HIF3A-219ENST00000600879 ALDH1L1O75891 902 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 HHIPL2Q6UWX4 724 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 NECAB2Q7Z6G3 386 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.52□□□□□ -0.41
HIF3A-219ENST00000600879 ANKRD13CQ8N6S4 541 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 SRCIN1Q9C0H9 1055 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.52□□□□□ -0.41
HIF3A-219ENST00000600879 ZNF112Q9UJU3 913 aa12.52□□□□□ -0.41
HIF3A-219ENST00000600879 DAGLAQ9Y4D2 1042 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms