RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 ZBED3Q96IU2 234 aaPredicted RBP22.92■■□□□ 1.26
COPE-209ENST00000599964 EGFRP00533 1210 aa22.91■■□□□ 1.26
COPE-209ENST00000599964 NBPF9Q3BBW0 867 aa22.91■■□□□ 1.26
COPE-209ENST00000599964 APOBEC3HQ6NTF7 200 aaKnown RBP22.91■■□□□ 1.26
COPE-209ENST00000599964 CLEC11AQ9Y240 323 aa22.91■■□□□ 1.26
COPE-209ENST00000599964 ADAMTSL1Q8N6G6 1762 aa22.91■■□□□ 1.26
COPE-209ENST00000599964 MAGEB6P1A0A0J9YX57 407 aa22.9■■□□□ 1.26
COPE-209ENST00000599964 PPP4CP60510 307 aa22.9■■□□□ 1.26
COPE-209ENST00000599964 ADGRA1Q86SQ6 560 aa22.9■■□□□ 1.26
COPE-209ENST00000599964 AIDAQ96BJ3 306 aa22.9■■□□□ 1.26
COPE-209ENST00000599964 TDRD3Q9H7E2 651 aaKnown RBP22.9■■□□□ 1.26
COPE-209ENST00000599964 USP40Q9NVE5 1235 aa22.9■■□□□ 1.26
COPE-209ENST00000599964 AATFQ9NY61 560 aaKnown RBP eCLIP22.9■■□□□ 1.26
COPE-209ENST00000599964 ECM29Q5VYK3 1845 aa22.89■■□□□ 1.26
COPE-209ENST00000599964 HIRAP54198 1017 aaPredicted RBP22.89■■□□□ 1.25
COPE-209ENST00000599964 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
COPE-209ENST00000599964 MIGA1Q8NAN2 632 aa22.89■■□□□ 1.25
COPE-209ENST00000599964 ZNF784Q8NCA9 323 aaPredicted RBP22.89■■□□□ 1.25
COPE-209ENST00000599964 DCPSQ96C86 337 aaKnown RBP22.89■■□□□ 1.25
COPE-209ENST00000599964 PCDHAC2Q9Y5I4 1007 aa22.89■■□□□ 1.25
COPE-209ENST00000599964 PITPNM2Q9BZ72 1349 aa22.88■■□□□ 1.25
COPE-209ENST00000599964 SPDYE2Q495Y8 402 aa22.88■■□□□ 1.25
COPE-209ENST00000599964 ZMYM1Q5SVZ6 1142 aa22.88■■□□□ 1.25
COPE-209ENST00000599964 CDC42EP5Q6NZY7 148 aa22.88■■□□□ 1.25
COPE-209ENST00000599964 LDHDQ86WU2 507 aa22.88■■□□□ 1.25
COPE-209ENST00000599964 APOBEC3FQ8IUX4 373 aaKnown RBP22.88■■□□□ 1.25
COPE-209ENST00000599964 RUFY2Q8WXA3 655 aa22.88■■□□□ 1.25
COPE-209ENST00000599964 HELLSQ9NRZ9 838 aa22.88■■□□□ 1.25
COPE-209ENST00000599964 ZNF70Q9UC06 446 aaPredicted RBP22.88■■□□□ 1.25
COPE-209ENST00000599964 TNNI2P48788 182 aa22.87■■□□□ 1.25
COPE-209ENST00000599964 MFAP1P55081 439 aaKnown RBP22.87■■□□□ 1.25
COPE-209ENST00000599964 TNFAIP1Q13829 316 aa22.87■■□□□ 1.25
COPE-209ENST00000599964 ANGEL2Q5VTE6 544 aaKnown RBP22.87■■□□□ 1.25
COPE-209ENST00000599964 VEZTQ9HBM0 779 aa22.87■■□□□ 1.25
COPE-209ENST00000599964 GGA3Q9NZ52 723 aa22.87■■□□□ 1.25
COPE-209ENST00000599964 CLRN2A0PK11 232 aa22.86■■□□□ 1.25
COPE-209ENST00000599964 FKBP1CQ5VVH2 108 aa22.86■■□□□ 1.25
COPE-209ENST00000599964 TEX11Q8IYF3 940 aa22.86■■□□□ 1.25
COPE-209ENST00000599964 OSBP2Q969R2 916 aa22.86■■□□□ 1.25
COPE-209ENST00000599964 CRNKL1Q9BZJ0 848 aaKnown RBP22.86■■□□□ 1.25
COPE-209ENST00000599964 PGAP2Q9UHJ9 254 aa22.86■■□□□ 1.25
COPE-209ENST00000599964 CDC45O75419 566 aa22.85■■□□□ 1.25
COPE-209ENST00000599964 MBD4O95243 580 aa22.85■■□□□ 1.25
COPE-209ENST00000599964 DYNLL1P63167 89 aaKnown RBP22.85■■□□□ 1.25
COPE-209ENST00000599964 NMIQ13287 307 aaPredicted RBP22.85■■□□□ 1.25
COPE-209ENST00000599964 SLFNL1Q499Z3 407 aa22.85■■□□□ 1.25
COPE-209ENST00000599964 MCMDC2Q4G0Z9 681 aa22.85■■□□□ 1.25
COPE-209ENST00000599964 SH3RF3Q8TEJ3 882 aaPredicted RBP22.85■■□□□ 1.25
COPE-209ENST00000599964 RIOK1Q9BRS2 568 aaKnown RBP22.85■■□□□ 1.25
COPE-209ENST00000599964 PUS7LQ9H0K6 701 aaKnown RBP22.85■■□□□ 1.25
COPE-209ENST00000599964 CHGBP05060 677 aa22.84■■□□□ 1.25
COPE-209ENST00000599964 GNAT2P19087 354 aa22.84■■□□□ 1.25
COPE-209ENST00000599964 CHMLP26374 656 aa22.84■■□□□ 1.25
COPE-209ENST00000599964 RHBDL3P58872 404 aa22.84■■□□□ 1.25
COPE-209ENST00000599964 CWC27Q6UX04 472 aaKnown RBP22.84■■□□□ 1.25
COPE-209ENST00000599964 SULF1Q8IWU6 871 aa22.84■■□□□ 1.25
COPE-209ENST00000599964 DDRGK1Q96HY6 314 aa22.84■■□□□ 1.25
COPE-209ENST00000599964 ARMT1Q9H993 441 aa22.84■■□□□ 1.25
COPE-209ENST00000599964 KIF3CO14782 793 aa22.83■■□□□ 1.25
COPE-209ENST00000599964 GPAA1O43292 621 aa22.83■■□□□ 1.25
COPE-209ENST00000599964 USP5P45974 858 aa22.83■■□□□ 1.25
COPE-209ENST00000599964 LCORLQ8N3X6 602 aa22.83■■□□□ 1.25
COPE-209ENST00000599964 FAM227BQ96M60 508 aa22.83■■□□□ 1.25
COPE-209ENST00000599964 IDI2Q9BXS1 227 aa22.83■■□□□ 1.25
COPE-209ENST00000599964 ASTN2O75129 1339 aaPredicted RBP22.82■■□□□ 1.24
COPE-209ENST00000599964 RAD50Q92878 1312 aa22.82■■□□□ 1.24
COPE-209ENST00000599964 A0A0D9SFI3 127 aa22.82■■□□□ 1.24
COPE-209ENST00000599964 M0R2C6 588 aa22.82■■□□□ 1.24
COPE-209ENST00000599964 CDC37L1Q7L3B6 337 aa22.82■■□□□ 1.24
COPE-209ENST00000599964 FAM83AQ86UY5 434 aa22.82■■□□□ 1.24
COPE-209ENST00000599964 SEC62Q99442 399 aaKnown RBP22.82■■□□□ 1.24
COPE-209ENST00000599964 PPP2R3BQ9Y5P8 575 aa22.82■■□□□ 1.24
COPE-209ENST00000599964 TCP10L2B9ZVM9 353 aa22.81■■□□□ 1.24
COPE-209ENST00000599964 ENTPD3O75355 529 aa22.81■■□□□ 1.24
COPE-209ENST00000599964 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
COPE-209ENST00000599964 CACNB3P54284 484 aa22.81■■□□□ 1.24
COPE-209ENST00000599964 CHADLQ6NUI6 762 aa22.81■■□□□ 1.24
COPE-209ENST00000599964 KRT26Q7Z3Y9 468 aa22.81■■□□□ 1.24
COPE-209ENST00000599964 TGFBRAP1Q8WUH2 860 aa22.81■■□□□ 1.24
COPE-209ENST00000599964 STRBPQ96SI9 672 aaKnown RBP22.81■■□□□ 1.24
COPE-209ENST00000599964 WDHD1O75717 1129 aaPredicted RBP22.8■■□□□ 1.24
COPE-209ENST00000599964 POTEIP0CG38 1075 aa22.8■■□□□ 1.24
COPE-209ENST00000599964 POTEJP0CG39 1038 aa22.8■■□□□ 1.24
COPE-209ENST00000599964 PICALMQ13492 652 aa22.8■■□□□ 1.24
COPE-209ENST00000599964 FAM151AQ8WW52 585 aa22.8■■□□□ 1.24
COPE-209ENST00000599964 ATP8A2Q9NTI2 1148 aa22.8■■□□□ 1.24
COPE-209ENST00000599964 SLC4A4Q9Y6R1 1079 aa22.8■■□□□ 1.24
COPE-209ENST00000599964 CCDC171Q6TFL3 1326 aa22.8■■□□□ 1.24
COPE-209ENST00000599964 RPAP1Q9BWH6 1393 aaPredicted RBP22.79■■□□□ 1.24
COPE-209ENST00000599964 TOMM70O94826 608 aa22.79■■□□□ 1.24
COPE-209ENST00000599964 SMC1BQ8NDV3 1235 aa22.79■■□□□ 1.24
COPE-209ENST00000599964 NACAP1Q9BZK3 213 aa22.79■■□□□ 1.24
COPE-209ENST00000599964 DEFB129Q9H1M3 183 aa22.79■■□□□ 1.24
COPE-209ENST00000599964 APPP05067 770 aa22.78■■□□□ 1.24
COPE-209ENST00000599964 NFIAQ12857 509 aa22.78■■□□□ 1.24
COPE-209ENST00000599964 RASA3Q14644 834 aa22.78■■□□□ 1.24
COPE-209ENST00000599964 MAP1SQ66K74 1059 aaPredicted RBP22.78■■□□□ 1.24
COPE-209ENST00000599964 MAPKAPK5Q8IW41 473 aa22.78■■□□□ 1.24
COPE-209ENST00000599964 RBM46Q8TBY0 533 aaKnown RBP22.78■■□□□ 1.24
COPE-209ENST00000599964 PATL2C9JE40 543 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms