RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 LAMA4Q16363 1823 aa25.03■■□□□ 1.6
IRF3-214ENST00000596788 DCAF8L1A6NGE4 600 aa25.03■■□□□ 1.6
IRF3-214ENST00000596788 DDNO94850 711 aaPredicted RBP25.03■■□□□ 1.6
IRF3-214ENST00000596788 REC8O95072 547 aa25.03■■□□□ 1.6
IRF3-214ENST00000596788 ZNF280AP59817 542 aaPredicted RBP25.03■■□□□ 1.6
IRF3-214ENST00000596788 CFAP100Q494V2 611 aa25.03■■□□□ 1.6
IRF3-214ENST00000596788 NOL10Q9BSC4 688 aaKnown RBP25.03■■□□□ 1.6
IRF3-214ENST00000596788 PTH1RQ03431 593 aa25.02■■□□□ 1.6
IRF3-214ENST00000596788 APOBEC3HQ6NTF7 200 aaKnown RBP25.02■■□□□ 1.6
IRF3-214ENST00000596788 MICALL2Q8IY33 904 aa25.02■■□□□ 1.6
IRF3-214ENST00000596788 OGFOD1Q8N543 542 aa25.02■■□□□ 1.6
IRF3-214ENST00000596788 SH3RF3Q8TEJ3 882 aaPredicted RBP25.02■■□□□ 1.6
IRF3-214ENST00000596788 BAZ2AQ9UIF9 1905 aaKnown RBP25.02■■□□□ 1.6
IRF3-214ENST00000596788 LAMB1P07942 1786 aa25.01■■□□□ 1.59
IRF3-214ENST00000596788 BAG3O95817 575 aa25.01■■□□□ 1.59
IRF3-214ENST00000596788 RBM5P52756 815 aaKnown RBP eCLIP25.01■■□□□ 1.59
IRF3-214ENST00000596788 RHBDL3P58872 404 aa25.01■■□□□ 1.59
IRF3-214ENST00000596788 KIAA1211Q6ZU35 1233 aa25.01■■□□□ 1.59
IRF3-214ENST00000596788 PRKAB2O43741 272 aa25■■□□□ 1.59
IRF3-214ENST00000596788 HSPD1P10809 573 aaKnown RBP25■■□□□ 1.59
IRF3-214ENST00000596788 GPRC5DQ9NZD1 345 aa25■■□□□ 1.59
IRF3-214ENST00000596788 CNOT7Q9UIV1 285 aaKnown RBP25■■□□□ 1.59
IRF3-214ENST00000596788 WDR90Q96KV7 1748 aa25■■□□□ 1.59
IRF3-214ENST00000596788 SPDYE2BA6NHP3 402 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 EIF5BO60841 1220 aaKnown RBP24.99■■□□□ 1.59
IRF3-214ENST00000596788 SPDYE6P0CI01 402 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 MMP14P50281 582 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 CERS3Q8IU89 383 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 MTMR14Q8NCE2 650 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 ZBED3Q96IU2 234 aaPredicted RBP24.99■■□□□ 1.59
IRF3-214ENST00000596788 DSCC1Q9BVC3 393 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 CRNKL1Q9BZJ0 848 aaKnown RBP24.99■■□□□ 1.59
IRF3-214ENST00000596788 EPB41L4AQ9HCS5 686 aaPredicted RBP24.99■■□□□ 1.59
IRF3-214ENST00000596788 MYOZ2Q9NPC6 264 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 SLC4A4Q9Y6R1 1079 aa24.99■■□□□ 1.59
IRF3-214ENST00000596788 PLCG2P16885 1265 aa24.98■■□□□ 1.59
IRF3-214ENST00000596788 GNAT2P19087 354 aa24.98■■□□□ 1.59
IRF3-214ENST00000596788 DLGAP5Q15398 846 aa24.98■■□□□ 1.59
IRF3-214ENST00000596788 CDC42EP5Q6NZY7 148 aa24.98■■□□□ 1.59
IRF3-214ENST00000596788 SDR42E1Q8WUS8 393 aa24.98■■□□□ 1.59
IRF3-214ENST00000596788 SCN4AP35499 1836 aa24.98■■□□□ 1.59
IRF3-214ENST00000596788 MYH1P12882 1939 aa24.97■■□□□ 1.59
IRF3-214ENST00000596788 GSG1L2A8MUP6 293 aa24.97■■□□□ 1.59
IRF3-214ENST00000596788 EGFRP00533 1210 aa24.97■■□□□ 1.59
IRF3-214ENST00000596788 TEX11Q8IYF3 940 aa24.97■■□□□ 1.59
IRF3-214ENST00000596788 L3MBTL3Q96JM7 780 aaPredicted RBP24.97■■□□□ 1.59
IRF3-214ENST00000596788 PRMT6Q96LA8 375 aaPredicted RBP24.97■■□□□ 1.59
IRF3-214ENST00000596788 USP26Q9BXU7 913 aa24.97■■□□□ 1.59
IRF3-214ENST00000596788 RPAP1Q9BWH6 1393 aaPredicted RBP24.96■■□□□ 1.59
IRF3-214ENST00000596788 GLTPD2A6NH11 291 aa24.96■■□□□ 1.59
IRF3-214ENST00000596788 DPY19L2Q6NUT2 758 aa24.96■■□□□ 1.59
IRF3-214ENST00000596788 SAMD7Q7Z3H4 446 aa24.96■■□□□ 1.59
IRF3-214ENST00000596788 MAP4K1Q92918 833 aa24.96■■□□□ 1.59
IRF3-214ENST00000596788 USP40Q9NVE5 1235 aa24.96■■□□□ 1.59
IRF3-214ENST00000596788 RBM8AQ9Y5S9 174 aaKnown RBP24.96■■□□□ 1.59
IRF3-214ENST00000596788 PATL2C9JE40 543 aaKnown RBP24.95■■□□□ 1.58
IRF3-214ENST00000596788 EPS15P42566 896 aa24.95■■□□□ 1.58
IRF3-214ENST00000596788 ZMYM6O95789 1325 aa24.94■■□□□ 1.58
IRF3-214ENST00000596788 H7C1D1 291 aa24.94■■□□□ 1.58
IRF3-214ENST00000596788 EPB41L2O43491 1005 aaKnown RBP24.94■■□□□ 1.58
IRF3-214ENST00000596788 WDHD1O75717 1129 aaPredicted RBP24.94■■□□□ 1.58
IRF3-214ENST00000596788 APPP05067 770 aa24.94■■□□□ 1.58
IRF3-214ENST00000596788 KIF4BQ2VIQ3 1234 aa24.94■■□□□ 1.58
IRF3-214ENST00000596788 TBC1D10BQ4KMP7 808 aaPredicted RBP24.94■■□□□ 1.58
IRF3-214ENST00000596788 TRPM4Q8TD43 1214 aa24.94■■□□□ 1.58
IRF3-214ENST00000596788 TDRD3Q9H7E2 651 aaKnown RBP24.94■■□□□ 1.58
IRF3-214ENST00000596788 FLT1P17948 1338 aa24.93■■□□□ 1.58
IRF3-214ENST00000596788 WNT10BO00744 389 aa24.93■■□□□ 1.58
IRF3-214ENST00000596788 LMOD1P29536 600 aaPredicted RBP24.93■■□□□ 1.58
IRF3-214ENST00000596788 NBPF9Q3BBW0 867 aa24.93■■□□□ 1.58
IRF3-214ENST00000596788 RBM26Q5T8P6 1007 aaKnown RBP24.93■■□□□ 1.58
IRF3-214ENST00000596788 IFNL3Q8IZI9 196 aa24.93■■□□□ 1.58
IRF3-214ENST00000596788 TGFBRAP1Q8WUH2 860 aa24.93■■□□□ 1.58
IRF3-214ENST00000596788 DCP1AQ9NPI6 582 aaPredicted RBP24.93■■□□□ 1.58
IRF3-214ENST00000596788 U3KPZ7 1027 aaPredicted RBP24.93■■□□□ 1.58
IRF3-214ENST00000596788 USP5P45974 858 aa24.92■■□□□ 1.58
IRF3-214ENST00000596788 CACNB3P54284 484 aa24.92■■□□□ 1.58
IRF3-214ENST00000596788 ALX1Q15699 326 aa24.92■■□□□ 1.58
IRF3-214ENST00000596788 SPDYE2Q495Y8 402 aa24.92■■□□□ 1.58
IRF3-214ENST00000596788 MAPKAPK5Q8IW41 473 aa24.92■■□□□ 1.58
IRF3-214ENST00000596788 UPF2Q9HAU5 1272 aaKnown RBP24.92■■□□□ 1.58
IRF3-214ENST00000596788 DDX4Q9NQI0 724 aaKnown RBP24.92■■□□□ 1.58
IRF3-214ENST00000596788 ATP8A2Q9NTI2 1148 aa24.92■■□□□ 1.58
IRF3-214ENST00000596788 MKRN1Q9UHC7 482 aaKnown RBP24.92■■□□□ 1.58
IRF3-214ENST00000596788 CLRN2A0PK11 232 aa24.91■■□□□ 1.58
IRF3-214ENST00000596788 FGAP02671 866 aa24.91■■□□□ 1.58
IRF3-214ENST00000596788 NFIAQ12857 509 aa24.91■■□□□ 1.58
IRF3-214ENST00000596788 GIMAP6Q6P9H5 292 aa24.91■■□□□ 1.58
IRF3-214ENST00000596788 NACAP1Q9BZK3 213 aa24.91■■□□□ 1.58
IRF3-214ENST00000596788 NAPBQ9H115 298 aa24.91■■□□□ 1.58
IRF3-214ENST00000596788 ZNF70Q9UC06 446 aaPredicted RBP24.91■■□□□ 1.58
IRF3-214ENST00000596788 TDO2P48775 406 aa24.9■■□□□ 1.58
IRF3-214ENST00000596788 NECTIN1Q15223 517 aa24.9■■□□□ 1.58
IRF3-214ENST00000596788 SIPA1L1O43166 1804 aa24.9■■□□□ 1.58
IRF3-214ENST00000596788 ASTN2O75129 1339 aaPredicted RBP24.89■■□□□ 1.58
IRF3-214ENST00000596788 HSPA4P34932 840 aa24.89■■□□□ 1.58
IRF3-214ENST00000596788 PICALMQ13492 652 aa24.89■■□□□ 1.58
IRF3-214ENST00000596788 IDI2Q9BXS1 227 aa24.89■■□□□ 1.58
IRF3-214ENST00000596788 C22orf23Q9BZE7 217 aa24.89■■□□□ 1.58
IRF3-214ENST00000596788 ADARB2Q9NS39 739 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms