RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 SCRN1Q12765 414 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 SNW1Q13573 536 aaKnown RBP10□□□□□ -0.81
SIN3B-208ENST00000596638 HLFQ16534 295 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 CCDC144BQ3MJ40 725 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 CCDC144CPQ8IYA2 1237 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 KBTBD3Q8NAB2 608 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 ZNF397Q8NF99 534 aaPredicted RBP10□□□□□ -0.81
SIN3B-208ENST00000596638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10□□□□□ -0.81
SIN3B-208ENST00000596638 ERO1AQ96HE7 468 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 RTEL1Q9NZ71 1219 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 DBNLQ9UJU6 430 aaKnown RBP10□□□□□ -0.81
SIN3B-208ENST00000596638 TAF6LQ9Y6J9 622 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10□□□□□ -0.81
SIN3B-208ENST00000596638 SALL1Q9NSC2 1324 aa10□□□□□ -0.81
SIN3B-208ENST00000596638 UBR2Q8IWV8 1755 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 AFDNP55196 1824 aaKnown RBP9.99□□□□□ -0.81
SIN3B-208ENST00000596638 H0YIN7 160 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 KINO60870 393 aaKnown RBP9.99□□□□□ -0.81
SIN3B-208ENST00000596638 CYP21A2P08686 494 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 SNRPA1P09661 255 aaKnown RBP9.99□□□□□ -0.81
SIN3B-208ENST00000596638 CCZ1BP86790 482 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
SIN3B-208ENST00000596638 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
SIN3B-208ENST00000596638 PTPN14Q15678 1187 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 DZIP3Q86Y13 1208 aaKnown RBP9.99□□□□□ -0.81
SIN3B-208ENST00000596638 DHX40Q8IX18 779 aaKnown RBP9.99□□□□□ -0.81
SIN3B-208ENST00000596638 CEP57L1Q8IYX8 460 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 ZNF622Q969S3 477 aaKnown RBP eCLIP9.99□□□□□ -0.816e-7■■□□□ 14.4
SIN3B-208ENST00000596638 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 CHMP3Q9Y3E7 222 aa9.99□□□□□ -0.81
SIN3B-208ENST00000596638 BECN2A8MW95 431 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 MYO1BO43795 1136 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 C21orf2O43822 256 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 CTDNEP1O95476 244 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 YEATS4O95619 227 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 HSP90B1P14625 803 aaKnown RBP9.98□□□□□ -0.81
SIN3B-208ENST00000596638 U2AF2P26368 475 aaKnown RBP eCLIP9.98□□□□□ -0.81
SIN3B-208ENST00000596638 STK3Q13188 491 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 EPHA10Q5JZY3 1008 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 ZMYM1Q5SVZ6 1142 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 ADALQ6DHV7 355 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 FMR1NBQ8N0W7 255 aaPredicted RBP9.98□□□□□ -0.81
SIN3B-208ENST00000596638 CCAR2Q8N163 923 aaKnown RBP9.98□□□□□ -0.81
SIN3B-208ENST00000596638 CCDC150Q8NCX0 1101 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 MRPS27Q92552 414 aaKnown RBP9.98□□□□□ -0.81
SIN3B-208ENST00000596638 C16orf45Q96MC5 204 aaPredicted RBP9.98□□□□□ -0.81
SIN3B-208ENST00000596638 TCEANC2Q96MN5 208 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 SETDB2Q96T68 719 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 NRXN2Q9P2S2 1712 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 LAMA4Q16363 1823 aa9.98□□□□□ -0.81
SIN3B-208ENST00000596638 PTPDC1A2A3K4 754 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 CCDC69A6NI79 296 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 CCP110O43303 1012 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 SLU7O95391 586 aaKnown RBP9.97□□□□□ -0.81
SIN3B-208ENST00000596638 SRGNP10124 158 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 SKILP12757 684 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 CASP7P55210 303 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 TFCP2Q12800 502 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 LRRFIP1Q32MZ4 808 aaKnown RBP9.97□□□□□ -0.81
SIN3B-208ENST00000596638 OLFM4Q6UX06 510 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 ANKRD13DQ6ZTN6 518 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 C11orf57Q6ZUT1 292 aaPredicted RBP9.97□□□□□ -0.81
SIN3B-208ENST00000596638 STOX1Q6ZVD7 989 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 FSIP1Q8NA03 581 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 KIF18AQ8NI77 898 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 KCNG4Q8TDN1 519 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 XAGE3Q8WTP9 111 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 TIGD1Q96MW7 591 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 MYD88Q99836 296 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 L2HGDHQ9H9P8 463 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
SIN3B-208ENST00000596638 KLRG2A4D1S0 409 aaPredicted RBP9.96□□□□□ -0.82
SIN3B-208ENST00000596638 GLTPD2A6NH11 291 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 FAM177BA6PVY3 158 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 H7C1W4 665 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 NRDCO43847 1150 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 MYCNP04198 464 aaPredicted RBP9.96□□□□□ -0.82
SIN3B-208ENST00000596638 LMNB1P20700 586 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 TPM4P67936 248 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 CLEC4GQ6UXB4 293 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 TTLL7Q6ZT98 887 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 COPS6Q7L5N1 327 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 BRAPQ7Z569 592 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 USP28Q96RU2 1077 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 SIL1Q9H173 461 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 GOLPH3LQ9H4A5 285 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 PRDM10Q9NQV6 1147 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 ABCC12Q96J65 1359 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 SBF1O95248 1867 aa9.96□□□□□ -0.82
SIN3B-208ENST00000596638 IKBKBO14920 756 aa9.95□□□□□ -0.82
SIN3B-208ENST00000596638 RNF113AO15541 343 aaKnown RBP9.95□□□□□ -0.82
SIN3B-208ENST00000596638 DHX16O60231 1041 aaKnown RBP9.95□□□□□ -0.82
SIN3B-208ENST00000596638 CIAO1O76071 339 aa9.95□□□□□ -0.82
SIN3B-208ENST00000596638 PDIA3P30101 505 aaKnown RBP9.95□□□□□ -0.82
SIN3B-208ENST00000596638 PDE6BP35913 854 aa9.95□□□□□ -0.82
SIN3B-208ENST00000596638 IL15P40933 162 aaPredicted RBP9.95□□□□□ -0.82
SIN3B-208ENST00000596638 NLRP12P59046 1061 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms