RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 HOXB7P09629 217 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 NPR1P16066 1061 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 C1QTNF8P60827 252 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 CLDN10P78369 228 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 AIMP1Q12904 312 aaKnown RBP10.63□□□□□ -0.71
FARP1-220ENST00000596613 PTK7Q13308 1070 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 C9orf131Q5VYM1 1079 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 OGFOD1Q8N543 542 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
FARP1-220ENST00000596613 WIPF1O43516 503 aa10.62□□□□□ -0.71
FARP1-220ENST00000596613 LMNB1P20700 586 aa10.62□□□□□ -0.71
FARP1-220ENST00000596613 PDE4CQ08493 712 aa10.62□□□□□ -0.71
FARP1-220ENST00000596613 NR5A1Q13285 461 aa10.62□□□□□ -0.71
FARP1-220ENST00000596613 RPGRQ92834 1020 aaKnown RBP10.62□□□□□ -0.71
FARP1-220ENST00000596613 DDX21Q9NR30 783 aaKnown RBP eCLIP10.62□□□□□ -0.71
FARP1-220ENST00000596613 IFT57Q9NWB7 429 aa10.62□□□□□ -0.71
FARP1-220ENST00000596613 HYPKQ9NX55 129 aa10.62□□□□□ -0.71
FARP1-220ENST00000596613 DBF4Q9UBU7 674 aaPredicted RBP10.62□□□□□ -0.71
FARP1-220ENST00000596613 ZMIZ1Q9ULJ6 1067 aa10.62□□□□□ -0.71
FARP1-220ENST00000596613 NOVA2Q9UNW9 492 aaKnown RBP10.62□□□□□ -0.71
FARP1-220ENST00000596613 N4BP2Q86UW6 1770 aaPredicted RBP10.62□□□□□ -0.71
FARP1-220ENST00000596613 KIF13BQ9NQT8 1826 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 ATP10DQ9P241 1426 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 DLG5Q8TDM6 1919 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 C21orf2O43822 256 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 SRGNP10124 158 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 HSP90B1P14625 803 aaKnown RBP10.61□□□□□ -0.71
FARP1-220ENST00000596613 GPTP24298 496 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 SCTRP47872 440 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 GTF2IP78347 998 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
FARP1-220ENST00000596613 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
FARP1-220ENST00000596613 HLFQ16534 295 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 COPS6Q7L5N1 327 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 RBM17Q96I25 401 aaKnown RBP10.61□□□□□ -0.71
FARP1-220ENST00000596613 NLRP3Q96P20 1036 aa10.61□□□□□ -0.71
FARP1-220ENST00000596613 UTP14AQ9BVJ6 771 aaKnown RBP10.61□□□□□ -0.71
FARP1-220ENST00000596613 DNAAF2Q9NVR5 837 aaKnown RBP10.61□□□□□ -0.71
FARP1-220ENST00000596613 DDX58O95786 925 aaKnown RBP10.6□□□□□ -0.71
FARP1-220ENST00000596613 NR3C2P08235 984 aa10.6□□□□□ -0.71
FARP1-220ENST00000596613 DUSP27Q5VZP5 1158 aa10.6□□□□□ -0.71
FARP1-220ENST00000596613 TTLL7Q6ZT98 887 aa10.6□□□□□ -0.71
FARP1-220ENST00000596613 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
FARP1-220ENST00000596613 RTKN2Q8IZC4 609 aa10.6□□□□□ -0.71
FARP1-220ENST00000596613 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
FARP1-220ENST00000596613 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
FARP1-220ENST00000596613 TMPRSS4Q9NRS4 437 aa10.6□□□□□ -0.71
FARP1-220ENST00000596613 SENP3-EIF4A1A0A087X0R7 540 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 CARNS1A5YM72 827 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 TMEM88BA6NKF7 163 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 MYCP01106 439 aaPredicted RBP10.59□□□□□ -0.71
FARP1-220ENST00000596613 ERVK-9P63128 1117 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 CCDC93Q567U6 631 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 CCDC30Q5VVM6 783 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 XAGE3Q8WTP9 111 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 STK31Q9BXU1 1019 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 TAOK3Q9H2K8 898 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 KIAA1024Q9UPX6 916 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 PCDHGA11Q9Y5H2 935 aa10.59□□□□□ -0.71
FARP1-220ENST00000596613 ZBTB7BO15156 539 aaPredicted RBP10.58□□□□□ -0.72
FARP1-220ENST00000596613 NNTQ13423 1086 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
FARP1-220ENST00000596613 TMEM164Q5U3C3 297 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 PRPF40BQ6NWY9 871 aaKnown RBP10.58□□□□□ -0.72
FARP1-220ENST00000596613 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 PLBD2Q8NHP8 589 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 CYLDQ9NQC7 956 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 MBIPQ9NS73 344 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
FARP1-220ENST00000596613 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.72
FARP1-220ENST00000596613 ELL2O00472 640 aaPredicted RBP10.57□□□□□ -0.72
FARP1-220ENST00000596613 TOMM70O94826 608 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 TCIRG1Q13488 830 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 SUSD4Q5VX71 490 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 TRIM46Q7Z4K8 759 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 FAM9BQ8IZU0 186 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 SIX5Q8N196 739 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 FAM200AQ8TCP9 573 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 CHPF2Q9P2E5 772 aa10.57□□□□□ -0.72
FARP1-220ENST00000596613 AFDNP55196 1824 aaKnown RBP10.56□□□□□ -0.72
FARP1-220ENST00000596613 DKK1O94907 266 aa10.56□□□□□ -0.72
FARP1-220ENST00000596613 ANXA1P04083 346 aa10.56□□□□□ -0.72
FARP1-220ENST00000596613 BMP1P13497 986 aa10.56□□□□□ -0.72
FARP1-220ENST00000596613 RASSF7Q02833 373 aa10.56□□□□□ -0.72
FARP1-220ENST00000596613 DPYDQ12882 1025 aa10.56□□□□□ -0.72
FARP1-220ENST00000596613 DDX46Q7L014 1031 aaKnown RBP10.56□□□□□ -0.72
FARP1-220ENST00000596613 JDP2Q8WYK2 163 aa10.56□□□□□ -0.72
FARP1-220ENST00000596613 RRAGCQ9HB90 399 aa10.56□□□□□ -0.72
FARP1-220ENST00000596613 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms