RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 PTPDC1A2A3K4 754 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 MMP10P09238 476 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 SPTY2D1Q68D10 685 aaPredicted RBP17.12■□□□□ 0.33
PAF1-204ENST00000595564 MFSD6Q6ZSS7 791 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 GPT2Q8TD30 523 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 CNNM2Q9H8M5 875 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 CNPY2Q9Y2B0 182 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
PAF1-204ENST00000595564 TIAM2Q8IVF5 1701 aa17.11■□□□□ 0.33
PAF1-204ENST00000595564 GOLGA8BA8MQT2 603 aa17.11■□□□□ 0.33
PAF1-204ENST00000595564 SH2B2O14492 632 aaPredicted RBP17.11■□□□□ 0.33
PAF1-204ENST00000595564 PPEF1O14829 653 aaPredicted RBP17.11■□□□□ 0.33
PAF1-204ENST00000595564 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
PAF1-204ENST00000595564 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
PAF1-204ENST00000595564 WDR66Q8TBY9 1149 aa17.11■□□□□ 0.33
PAF1-204ENST00000595564 STAG1Q8WVM7 1258 aa17.11■□□□□ 0.33
PAF1-204ENST00000595564 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
PAF1-204ENST00000595564 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
PAF1-204ENST00000595564 PPARAQ07869 468 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 MSL1Q68DK7 614 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 TMC4Q7Z404 712 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 DZIP1Q86YF9 867 aaKnown RBP17.1■□□□□ 0.33
PAF1-204ENST00000595564 KRT23Q9C075 422 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 SALL1Q9NSC2 1324 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 ANKRD31Q8N7Z5 1873 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 KDM4AO75164 1064 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
PAF1-204ENST00000595564 CAVIN1Q6NZI2 390 aaKnown RBP17.1■□□□□ 0.33
PAF1-204ENST00000595564 TMED8Q6PL24 325 aaPredicted RBP17.1■□□□□ 0.33
PAF1-204ENST00000595564 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 AATFQ9NY61 560 aaKnown RBP eCLIP17.1■□□□□ 0.33
PAF1-204ENST00000595564 HPS5Q9UPZ3 1129 aa17.1■□□□□ 0.33
PAF1-204ENST00000595564 RGPD3A6NKT7 1758 aaPredicted RBP17.09■□□□□ 0.33
PAF1-204ENST00000595564 MAST2Q6P0Q8 1798 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 RGPD4Q7Z3J3 1758 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 H3BQV1 296 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 MBD3O95983 291 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
PAF1-204ENST00000595564 DNM1Q05193 864 aaKnown RBP17.09■□□□□ 0.33
PAF1-204ENST00000595564 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 SP8Q8IXZ3 490 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
PAF1-204ENST00000595564 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 POLLQ9UGP5 575 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
PAF1-204ENST00000595564 CHD4Q14839 1912 aa17.08■□□□□ 0.33
PAF1-204ENST00000595564 SRGNP10124 158 aa17.08■□□□□ 0.33
PAF1-204ENST00000595564 NPR1P16066 1061 aa17.08■□□□□ 0.33
PAF1-204ENST00000595564 PDE6BP35913 854 aa17.08■□□□□ 0.33
PAF1-204ENST00000595564 EZH2Q15910 746 aaKnown RBP17.08■□□□□ 0.33
PAF1-204ENST00000595564 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.33
PAF1-204ENST00000595564 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.33
PAF1-204ENST00000595564 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 FIBPO43427 364 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 DHX16O60231 1041 aaKnown RBP17.07■□□□□ 0.32
PAF1-204ENST00000595564 PPFIA3O75145 1194 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
PAF1-204ENST00000595564 ANAPC4Q9UJX5 808 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 ATP6V0A2Q9Y487 856 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
PAF1-204ENST00000595564 GADD45BO75293 160 aaPredicted RBP17.07■□□□□ 0.32
PAF1-204ENST00000595564 IL1R1P14778 569 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 FOSBP53539 338 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
PAF1-204ENST00000595564 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 LY9Q9HBG7 655 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 SENP2Q9HC62 589 aa17.07■□□□□ 0.32
PAF1-204ENST00000595564 FSD2A1L4K1 749 aa17.06■□□□□ 0.32
PAF1-204ENST00000595564 CPLX1O14810 134 aa17.06■□□□□ 0.32
PAF1-204ENST00000595564 IGSF3O75054 1194 aa17.06■□□□□ 0.32
PAF1-204ENST00000595564 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
PAF1-204ENST00000595564 L1TD1Q5T7N2 865 aaKnown RBP17.06■□□□□ 0.32
PAF1-204ENST00000595564 CAMKK2Q96RR4 588 aa17.06■□□□□ 0.32
PAF1-204ENST00000595564 ANO8Q9HCE9 1232 aaPredicted RBP17.06■□□□□ 0.32
PAF1-204ENST00000595564 RBM27Q9P2N5 1060 aaKnown RBP17.06■□□□□ 0.32
PAF1-204ENST00000595564 TCHHQ07283 1943 aa17.06■□□□□ 0.32
PAF1-204ENST00000595564 LRRC37AA6NMS7 1700 aa17.06■□□□□ 0.32
PAF1-204ENST00000595564 CYP2D7A0A087X1C5 515 aa17.05■□□□□ 0.32
PAF1-204ENST00000595564 ALDH1B1P30837 517 aa17.05■□□□□ 0.32
PAF1-204ENST00000595564 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
PAF1-204ENST00000595564 GSTO1P78417 241 aa17.05■□□□□ 0.32
PAF1-204ENST00000595564 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
PAF1-204ENST00000595564 GRIK5Q16478 980 aa17.05■□□□□ 0.32
PAF1-204ENST00000595564 FAM173BQ6P4H8 233 aa17.05■□□□□ 0.32
PAF1-204ENST00000595564 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
PAF1-204ENST00000595564 SMIM22K7EJ46 135 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms