RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 RPS6KB1P23443 525 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 HAND2P61296 217 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 LAMB1P07942 1786 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 SDR42E1Q8WUS8 393 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 FBXW7Q969H0 707 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 FAM163AQ96GL9 167 aaPredicted RBP24.72■■□□□ 1.55
PNKP-203ENST00000593946 VPS33BQ9H267 617 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 PDRG1Q9NUG6 133 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 AK2P54819 239 aa24.71■■□□□ 1.55
PNKP-203ENST00000593946 FKBP1AP62942 108 aaKnown RBP24.71■■□□□ 1.55
PNKP-203ENST00000593946 STRIP1Q5VSL9 837 aa24.71■■□□□ 1.55
PNKP-203ENST00000593946 NBPF3Q9H094 633 aa24.71■■□□□ 1.55
PNKP-203ENST00000593946 KCNQ5Q9NR82 932 aa24.71■■□□□ 1.55
PNKP-203ENST00000593946 COL4A5P29400 1685 aa24.7■■□□□ 1.55
PNKP-203ENST00000593946 FOCADQ5VW36 1801 aa24.7■■□□□ 1.55
PNKP-203ENST00000593946 HMGB1P09429 215 aaKnown RBP24.7■■□□□ 1.54
PNKP-203ENST00000593946 TDO2P48775 406 aa24.7■■□□□ 1.54
PNKP-203ENST00000593946 PPP4CP60510 307 aa24.7■■□□□ 1.54
PNKP-203ENST00000593946 GIMAP6Q6P9H5 292 aa24.7■■□□□ 1.54
PNKP-203ENST00000593946 SLF2Q8IX21 1173 aa24.7■■□□□ 1.54
PNKP-203ENST00000593946 CRNKL1Q9BZJ0 848 aaKnown RBP24.7■■□□□ 1.54
PNKP-203ENST00000593946 ALDH8A1Q9H2A2 487 aaPredicted RBP24.7■■□□□ 1.54
PNKP-203ENST00000593946 GAKO14976 1311 aa24.7■■□□□ 1.54
PNKP-203ENST00000593946 NAV1Q8NEY1 1877 aa24.69■■□□□ 1.54
PNKP-203ENST00000593946 ADAMTSL1Q8N6G6 1762 aa24.69■■□□□ 1.54
PNKP-203ENST00000593946 BAG3O95817 575 aa24.69■■□□□ 1.54
PNKP-203ENST00000593946 CERS3Q8IU89 383 aa24.69■■□□□ 1.54
PNKP-203ENST00000593946 TMX3Q96JJ7 454 aa24.69■■□□□ 1.54
PNKP-203ENST00000593946 MXD3Q9BW11 206 aa24.69■■□□□ 1.54
PNKP-203ENST00000593946 GPR75-ASB3A0A0A6YYF3 556 aa24.68■■□□□ 1.54
PNKP-203ENST00000593946 USP17L3A6NCW0 530 aa24.68■■□□□ 1.54
PNKP-203ENST00000593946 USP17L4A6NCW7 530 aa24.68■■□□□ 1.54
PNKP-203ENST00000593946 DACT2Q5SW24 774 aa24.68■■□□□ 1.54
PNKP-203ENST00000593946 USP17L1Q7RTZ2 530 aa24.68■■□□□ 1.54
PNKP-203ENST00000593946 ZNF277Q9NRM2 450 aaPredicted RBP24.68■■□□□ 1.54
PNKP-203ENST00000593946 YDJCA8MPS7 323 aa24.67■■□□□ 1.54
PNKP-203ENST00000593946 TBC1D10CQ8IV04 446 aa24.67■■□□□ 1.54
PNKP-203ENST00000593946 SPRYD3Q8NCJ5 442 aa24.67■■□□□ 1.54
PNKP-203ENST00000593946 NLGN2Q8NFZ4 835 aa24.67■■□□□ 1.54
PNKP-203ENST00000593946 NOL10Q9BSC4 688 aaKnown RBP24.67■■□□□ 1.54
PNKP-203ENST00000593946 ATP8A2Q9NTI2 1148 aa24.67■■□□□ 1.54
PNKP-203ENST00000593946 NOL8Q76FK4 1167 aaKnown RBP24.66■■□□□ 1.54
PNKP-203ENST00000593946 DHX32Q7L7V1 743 aaKnown RBP24.66■■□□□ 1.54
PNKP-203ENST00000593946 TCEANC2Q96MN5 208 aa24.66■■□□□ 1.54
PNKP-203ENST00000593946 ECM29Q5VYK3 1845 aa24.66■■□□□ 1.54
PNKP-203ENST00000593946 LARGE2Q8N3Y3 721 aa24.66■■□□□ 1.54
PNKP-203ENST00000593946 DCP1AQ9NPI6 582 aaPredicted RBP24.66■■□□□ 1.54
PNKP-203ENST00000593946 TTF2Q9UNY4 1162 aaKnown RBP24.66■■□□□ 1.54
PNKP-203ENST00000593946 LIMCH1Q9UPQ0 1083 aa24.66■■□□□ 1.54
PNKP-203ENST00000593946 DDX60LQ5H9U9 1706 aaKnown RBP24.66■■□□□ 1.54
PNKP-203ENST00000593946 BTDP43251 543 aa24.65■■□□□ 1.54
PNKP-203ENST00000593946 EXOSC10Q01780 885 aaKnown RBP24.65■■□□□ 1.54
PNKP-203ENST00000593946 SH3RF3Q8TEJ3 882 aaPredicted RBP24.65■■□□□ 1.54
PNKP-203ENST00000593946 SLKQ9H2G2 1235 aaPredicted RBP24.65■■□□□ 1.54
PNKP-203ENST00000593946 BCS1LQ9Y276 419 aa24.65■■□□□ 1.54
PNKP-203ENST00000593946 DAGLAQ9Y4D2 1042 aa24.65■■□□□ 1.54
PNKP-203ENST00000593946 HSP90AA1P07900 732 aaKnown RBP24.64■■□□□ 1.54
PNKP-203ENST00000593946 CUL4AQ13619 759 aa24.64■■□□□ 1.54
PNKP-203ENST00000593946 TOB2Q14106 344 aaPredicted RBP24.64■■□□□ 1.54
PNKP-203ENST00000593946 ANKRD1Q15327 319 aa24.64■■□□□ 1.54
PNKP-203ENST00000593946 NCOA7Q8NI08 942 aa24.64■■□□□ 1.54
PNKP-203ENST00000593946 TAOK3Q9H2K8 898 aa24.64■■□□□ 1.54
PNKP-203ENST00000593946 ANAPC4Q9UJX5 808 aa24.64■■□□□ 1.54
PNKP-203ENST00000593946 F8W031 263 aaPredicted RBP24.64■■□□□ 1.53
PNKP-203ENST00000593946 PLCG2P16885 1265 aa24.64■■□□□ 1.53
PNKP-203ENST00000593946 IARSP41252 1262 aaKnown RBP24.64■■□□□ 1.53
PNKP-203ENST00000593946 MB21D2Q8IYB1 491 aaPredicted RBP24.64■■□□□ 1.53
PNKP-203ENST00000593946 MKRN1Q9UHC7 482 aaKnown RBP24.64■■□□□ 1.53
PNKP-203ENST00000593946 MYH1P12882 1939 aa24.63■■□□□ 1.53
PNKP-203ENST00000593946 NFKBIEO00221 500 aa24.63■■□□□ 1.53
PNKP-203ENST00000593946 CTDSPL2Q05D32 466 aa24.63■■□□□ 1.53
PNKP-203ENST00000593946 PPARAQ07869 468 aa24.63■■□□□ 1.53
PNKP-203ENST00000593946 RHBDL3P58872 404 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 AKNAD1Q5T1N1 836 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 CTR9Q6PD62 1173 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 HHIPL2Q6UWX4 724 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 RALYLQ86SE5 291 aaKnown RBP24.62■■□□□ 1.53
PNKP-203ENST00000593946 STAG1Q8WVM7 1258 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 AGXT2Q9BYV1 514 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 NEDD4P46934 1319 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 LTBP3Q9NS15 1303 aa24.62■■□□□ 1.53
PNKP-203ENST00000593946 DDIT3P35638 169 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 TRDNQ13061 729 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 Q6ZUG5 572 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 LARP6Q9BRS8 491 aaKnown RBP24.61■■□□□ 1.53
PNKP-203ENST00000593946 MRIQ9BWK5 157 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 WDR19Q8NEZ3 1342 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 SBK1Q52WX2 424 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 FBXL16Q8N461 479 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 TEKT1Q969V4 418 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 ZSCAN31Q96LW9 406 aaPredicted RBP24.61■■□□□ 1.53
PNKP-203ENST00000593946 TACC3Q9Y6A5 838 aa24.61■■□□□ 1.53
PNKP-203ENST00000593946 USP17L12C9JPN9 530 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 USP17L21D6R901 530 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 MCM5P33992 734 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 USP5P45974 858 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 SCNN1DP51172 638 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 HDLBPQ00341 1268 aaKnown RBP24.6■■□□□ 1.53
PNKP-203ENST00000593946 KIAA0825Q8IV33 1275 aa24.6■■□□□ 1.53
PNKP-203ENST00000593946 NIM1KQ8IY84 436 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms