RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 GAS2O43903 313 aaKnown RBP8.16□□□□□ -1.1
SMAD4-216ENST00000593223 RLBP1P12271 317 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 BMP6P22004 513 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 RBM25P49756 843 aaKnown RBP8.16□□□□□ -1.1
SMAD4-216ENST00000593223 DOC2BQ14184 412 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 SMG8Q8ND04 991 aaKnown RBP8.16□□□□□ -1.1
SMAD4-216ENST00000593223 GRIN3AQ8TCU5 1115 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 NOC4LQ9BVI4 516 aaKnown RBP8.16□□□□□ -1.1
SMAD4-216ENST00000593223 BACH2Q9BYV9 841 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 CYP8B1Q9UNU6 501 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 NISCHQ9Y2I1 1504 aa8.16□□□□□ -1.1
SMAD4-216ENST00000593223 AOC2O75106 756 aa8.15□□□□□ -1.1
SMAD4-216ENST00000593223 SLFN14P0C7P3 912 aa8.15□□□□□ -1.1
SMAD4-216ENST00000593223 Q6ZS46 218 aa8.15□□□□□ -1.1
SMAD4-216ENST00000593223 UBL7Q96S82 380 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-216ENST00000593223 KRT82Q9NSB4 513 aa8.15□□□□□ -1.1
SMAD4-216ENST00000593223 AP4E1Q9UPM8 1137 aa8.15□□□□□ -1.1
SMAD4-216ENST00000593223 UNCXA6NJT0 531 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 PROCP04070 461 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 DRD2P14416 443 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 PREPP48147 710 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 LIG3P49916 1009 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 ZNF252P-AS1Q0IIN9 211 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 DZIP1LQ8IYY4 767 aaKnown RBP8.14□□□□□ -1.11
SMAD4-216ENST00000593223 UTP4Q969X6 686 aaKnown RBP8.14□□□□□ -1.11
SMAD4-216ENST00000593223 ZNF428Q96B54 188 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 WDR18Q9BV38 432 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 SUGCTQ9HAC7 445 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
SMAD4-216ENST00000593223 F6X3S4 739 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 ZNF862O60290 1169 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 ADH5P11766 374 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 USP11P51784 963 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 SOX4Q06945 474 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-216ENST00000593223 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 DYMQ7RTS9 669 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 RELL1Q8IUW5 271 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 GPBAR1Q8TDU6 330 aa8.13□□□□□ -1.11
SMAD4-216ENST00000593223 WDR89Q96FK6 387 aaPredicted RBP8.13□□□□□ -1.11
SMAD4-216ENST00000593223 TRIM37O94972 964 aa8.12□□□□□ -1.11
SMAD4-216ENST00000593223 RPS26P62854 115 aaKnown RBP8.12□□□□□ -1.11
SMAD4-216ENST00000593223 UVSSAQ2YD98 709 aa8.12□□□□□ -1.11
SMAD4-216ENST00000593223 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
SMAD4-216ENST00000593223 HS2ST1Q7LGA3 356 aa8.12□□□□□ -1.11
SMAD4-216ENST00000593223 FAM46AQ96IP4 442 aaKnown RBP8.12□□□□□ -1.11
SMAD4-216ENST00000593223 SSBP4Q9BWG4 385 aaPredicted RBP8.12□□□□□ -1.11
SMAD4-216ENST00000593223 KCNF1Q9H3M0 494 aa8.12□□□□□ -1.11
SMAD4-216ENST00000593223 GGT7Q9UJ14 662 aa8.12□□□□□ -1.11
SMAD4-216ENST00000593223 PCDHA4Q9UN74 947 aa8.12□□□□□ -1.11
SMAD4-216ENST00000593223 DHX15O43143 795 aaKnown RBP8.11□□□□□ -1.11
SMAD4-216ENST00000593223 TIAF1O95411 115 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 VAMP1P23763 118 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 RXRBP28702 533 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 GBP2P32456 591 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-216ENST00000593223 ZNF76P36508 570 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 PWP1Q13610 501 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 KIF4BQ2VIQ3 1234 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 DIEXFQ68CQ4 756 aaKnown RBP8.11□□□□□ -1.11
SMAD4-216ENST00000593223 AGMOQ6ZNB7 445 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 KIAA1522Q9P206 1035 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-216ENST00000593223 TLR6Q9Y2C9 796 aa8.11□□□□□ -1.11
SMAD4-216ENST00000593223 MINDY4BA8MYZ0 360 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 RECKO95980 971 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 BMP3P12645 472 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 ID3Q02535 119 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 RSRP1Q9BUV0 290 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 KRTAP4-8Q9BYQ9 185 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 PICK1Q9NRD5 415 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 PPP1R9AQ9ULJ8 1098 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 PCDHB5Q9Y5E4 795 aa8.1□□□□□ -1.11
SMAD4-216ENST00000593223 ASPAP45381 313 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 SEPT6Q14141 434 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 SCARA3Q6AZY7 606 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-216ENST00000593223 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-216ENST00000593223 PHC3Q8NDX5 983 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 JARID2Q92833 1246 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-216ENST00000593223 MYRFLQ96LU7 910 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 YIPF2Q9BWQ6 316 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 PIDD1Q9HB75 910 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 ACTL7BQ9Y614 415 aa8.09□□□□□ -1.11
SMAD4-216ENST00000593223 SYNGAP1Q96PV0 1343 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 SCAMP3O14828 347 aaKnown RBP8.08□□□□□ -1.12
SMAD4-216ENST00000593223 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 TFE3P19532 575 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-216ENST00000593223 RAB6AP20340 208 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 SGO2Q562F6 1265 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 FAM20CQ8IXL6 584 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 ARMC10Q8N2F6 343 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 RNF34Q969K3 372 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 ELMO3Q96BJ8 720 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 TMEM74Q96NL1 305 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 ATXN3LQ9H3M9 355 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 KBTBD4Q9NVX7 518 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 HIF3AQ9Y2N7 669 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 CSADQ9Y600 493 aa8.08□□□□□ -1.12
SMAD4-216ENST00000593223 DCDC2CA8MYV0 355 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms