RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SLC27A3Q5K4L6 730 aa23.04■■□□□ 1.28
CLIP3-206ENST00000593074 ZSCAN30Q86W11 494 aa23.04■■□□□ 1.28
CLIP3-206ENST00000593074 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.03■■□□□ 1.28
CLIP3-206ENST00000593074 CPLX1O14810 134 aa23.03■■□□□ 1.28
CLIP3-206ENST00000593074 TM4SF1P30408 202 aa23.03■■□□□ 1.28
CLIP3-206ENST00000593074 MAP3K11Q16584 847 aa23.03■■□□□ 1.28
CLIP3-206ENST00000593074 RBM43Q6ZSC3 357 aaKnown RBP23.03■■□□□ 1.28
CLIP3-206ENST00000593074 ZNF396Q96N95 335 aaPredicted RBP23.03■■□□□ 1.28
CLIP3-206ENST00000593074 GUCY1B3Q02153 619 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 APOA5Q6Q788 366 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 SGMS1Q86VZ5 419 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 IGDCC4Q8TDY8 1250 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 FAM84BQ96KN1 310 aaPredicted RBP23.02■■□□□ 1.28
CLIP3-206ENST00000593074 NACAP1Q9BZK3 213 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 CNNM2Q9H8M5 875 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 ORC3Q9UBD5 711 aaPredicted RBP23.02■■□□□ 1.28
CLIP3-206ENST00000593074 CACNA1SQ13698 1873 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 CCDC192P0DO97 292 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 C8orf76Q96K31 380 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 CLSTN2Q9H4D0 955 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 SLC4A4Q9Y6R1 1079 aa23.02■■□□□ 1.28
CLIP3-206ENST00000593074 PRKAB2O43741 272 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 AKNAD1Q5T1N1 836 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 FBXO18Q8NFZ0 1043 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 BICD2Q8TD16 824 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 STAG1Q8WVM7 1258 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 USP28Q96RU2 1077 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 LY9Q9HBG7 655 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 TRIM37O94972 964 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 FBXO33Q7Z6M2 555 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 RAB11FIP4Q86YS3 637 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 ABCF2Q9UG63 623 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 TACC3Q9Y6A5 838 aa23.01■■□□□ 1.27
CLIP3-206ENST00000593074 NR1I2O75469 434 aa23■■□□□ 1.27
CLIP3-206ENST00000593074 LIFRP42702 1097 aa23■■□□□ 1.27
CLIP3-206ENST00000593074 METAP2P50579 478 aaKnown RBP eCLIP23■■□□□ 1.27
CLIP3-206ENST00000593074 CTDSPL2Q05D32 466 aa23■■□□□ 1.27
CLIP3-206ENST00000593074 CNBD1Q8NA66 436 aa23■■□□□ 1.27
CLIP3-206ENST00000593074 KRT23Q9C075 422 aa23■■□□□ 1.27
CLIP3-206ENST00000593074 FTOQ9C0B1 505 aaKnown RBP eCLIP23■■□□□ 1.27
CLIP3-206ENST00000593074 TNMDQ9H2S6 317 aa23■■□□□ 1.27
CLIP3-206ENST00000593074 CYP7A1P22680 504 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 TDO2P48775 406 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 ADGRA1Q86SQ6 560 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 RAI14Q9P0K7 980 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 NID2Q14112 1375 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 SEMA3EO15041 775 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 CDKL5O76039 1030 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 MIGA1Q8NAN2 632 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 SENP2Q9HC62 589 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 ZSWIM5Q9P217 1185 aa22.99■■□□□ 1.27
CLIP3-206ENST00000593074 CEBPZQ03701 1054 aaKnown RBP22.98■■□□□ 1.27
CLIP3-206ENST00000593074 CAMK4Q16566 473 aa22.98■■□□□ 1.27
CLIP3-206ENST00000593074 TMEM67Q5HYA8 995 aa22.98■■□□□ 1.27
CLIP3-206ENST00000593074 MFSD6Q6ZSS7 791 aa22.98■■□□□ 1.27
CLIP3-206ENST00000593074 INCENPQ9NQS7 918 aa22.98■■□□□ 1.27
CLIP3-206ENST00000593074 NOL7Q9UMY1 257 aaKnown RBP22.98■■□□□ 1.27
CLIP3-206ENST00000593074 PDS5AQ29RF7 1337 aaKnown RBP22.98■■□□□ 1.27
CLIP3-206ENST00000593074 KDM4AO75164 1064 aa22.97■■□□□ 1.27
CLIP3-206ENST00000593074 BRAPQ7Z569 592 aa22.97■■□□□ 1.27
CLIP3-206ENST00000593074 TNRC6CQ9HCJ0 1690 aaKnown RBP22.97■■□□□ 1.27
CLIP3-206ENST00000593074 ECM29Q5VYK3 1845 aa22.97■■□□□ 1.27
CLIP3-206ENST00000593074 HIBADHP31937 336 aaKnown RBP22.97■■□□□ 1.27
CLIP3-206ENST00000593074 MTA3Q9BTC8 594 aa22.97■■□□□ 1.27
CLIP3-206ENST00000593074 CCDC39Q9UFE4 941 aa22.97■■□□□ 1.27
CLIP3-206ENST00000593074 ZBTB43O43298 467 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 GYS1P13807 737 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 HMGB2P26583 209 aaKnown RBP22.96■■□□□ 1.27
CLIP3-206ENST00000593074 CDC27P30260 824 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 TYRO3Q06418 890 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 OTUD7BQ6GQQ9 843 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 RTEL1Q9NZ71 1219 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 USP25Q9UHP3 1055 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 MYH13Q9UKX3 1938 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 MAGEB6P1A0A0J9YX57 407 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 GRAPQ13588 217 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 MICU3Q86XE3 530 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 GRAPLQ8TC17 118 aaPredicted RBP22.96■■□□□ 1.27
CLIP3-206ENST00000593074 RIOK1Q9BRS2 568 aaKnown RBP22.96■■□□□ 1.27
CLIP3-206ENST00000593074 MRVI1Q9Y6F6 885 aa22.96■■□□□ 1.27
CLIP3-206ENST00000593074 KLRK1P26718 216 aa22.95■■□□□ 1.26
CLIP3-206ENST00000593074 NTRK3Q16288 839 aa22.95■■□□□ 1.26
CLIP3-206ENST00000593074 PRR5LQ6MZQ0 368 aa22.95■■□□□ 1.26
CLIP3-206ENST00000593074 CPLX2Q6PUV4 134 aaKnown RBP22.95■■□□□ 1.26
CLIP3-206ENST00000593074 NFXL1Q6ZNB6 911 aa22.95■■□□□ 1.26
CLIP3-206ENST00000593074 IFIT3O14879 490 aaKnown RBP22.94■■□□□ 1.26
CLIP3-206ENST00000593074 RNF41Q9H4P4 317 aaPredicted RBP22.94■■□□□ 1.26
CLIP3-206ENST00000593074 FAM217BQ9NTX9 383 aaPredicted RBP22.94■■□□□ 1.26
CLIP3-206ENST00000593074 TFCP2L1Q9NZI6 479 aa22.94■■□□□ 1.26
CLIP3-206ENST00000593074 ANAPC4Q9UJX5 808 aa22.94■■□□□ 1.26
CLIP3-206ENST00000593074 RXRAP19793 462 aa22.94■■□□□ 1.26
CLIP3-206ENST00000593074 KIF23Q02241 960 aaPredicted RBP22.94■■□□□ 1.26
CLIP3-206ENST00000593074 PPARAQ07869 468 aa22.94■■□□□ 1.26
CLIP3-206ENST00000593074 CKAP2LQ8IYA6 745 aa22.94■■□□□ 1.26
CLIP3-206ENST00000593074 FAM200AQ8TCP9 573 aa22.94■■□□□ 1.26
CLIP3-206ENST00000593074 POLR3EQ9NVU0 708 aa22.94■■□□□ 1.26
CLIP3-206ENST00000593074 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.94■■□□□ 1.26
CLIP3-206ENST00000593074 MAST2Q6P0Q8 1798 aa22.93■■□□□ 1.26
CLIP3-206ENST00000593074 GOLGA8AA7E2F4 631 aa22.93■■□□□ 1.26
CLIP3-206ENST00000593074 ZBTB22O15209 634 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms