RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 C2orf69Q8N8R5 385 aa18.7■□□□□ 0.58
TRIM47-206ENST00000592942 HHIPL1Q96JK4 782 aa18.7■□□□□ 0.58
TRIM47-206ENST00000592942 TMEM39BQ9GZU3 492 aa18.7■□□□□ 0.58
TRIM47-206ENST00000592942 USP40Q9NVE5 1235 aa18.7■□□□□ 0.58
TRIM47-206ENST00000592942 MROH7-TTC4A0A0A0MT08 1334 aa18.7■□□□□ 0.58
TRIM47-206ENST00000592942 RHBDL3P58872 404 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 NFIAQ12857 509 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 ADGRA1Q86SQ6 560 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 FAM83AQ86UY5 434 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 SLF2Q8IX21 1173 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 GCC1Q96CN9 775 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 BOLA2Q9H3K6 86 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 FAM198AQ9UFP1 575 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 FZD1Q9UP38 647 aa18.69■□□□□ 0.58
TRIM47-206ENST00000592942 SSC5DA1L4H1 1573 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 IGSF3O75054 1194 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 BTDP43251 543 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 HUNKP57058 714 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 FKBP1BP68106 108 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 TNFAIP1Q13829 316 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-206ENST00000592942 EDC3Q96F86 508 aaKnown RBP18.68■□□□□ 0.58
TRIM47-206ENST00000592942 HAUS7Q99871 368 aa18.68■□□□□ 0.58
TRIM47-206ENST00000592942 UBE2Q2LH0YL09 131 aa18.67■□□□□ 0.58
TRIM47-206ENST00000592942 WDHD1O75717 1129 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-206ENST00000592942 LDHCP07864 332 aa18.67■□□□□ 0.58
TRIM47-206ENST00000592942 GSTO1P78417 241 aa18.67■□□□□ 0.58
TRIM47-206ENST00000592942 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
TRIM47-206ENST00000592942 CYP4F22Q6NT55 531 aa18.67■□□□□ 0.58
TRIM47-206ENST00000592942 ZFPM1Q8IX07 1006 aa18.67■□□□□ 0.58
TRIM47-206ENST00000592942 IDI2Q9BXS1 227 aa18.67■□□□□ 0.58
TRIM47-206ENST00000592942 RWDD1Q9H446 243 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-206ENST00000592942 USP2O75604 605 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-206ENST00000592942 HSPA1AP0DMV8 641 aaKnown RBP18.66■□□□□ 0.58
TRIM47-206ENST00000592942 HSPA1BP0DMV9 641 aaKnown RBP18.66■□□□□ 0.58
TRIM47-206ENST00000592942 PPP4CP60510 307 aa18.66■□□□□ 0.58
TRIM47-206ENST00000592942 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
TRIM47-206ENST00000592942 SUPT20HL1Q3ZLR7 823 aa18.66■□□□□ 0.58
TRIM47-206ENST00000592942 LDLRAD1Q5T700 205 aa18.66■□□□□ 0.58
TRIM47-206ENST00000592942 NAA16Q6N069 864 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-206ENST00000592942 CAPNS2Q96L46 248 aa18.66■□□□□ 0.58
TRIM47-206ENST00000592942 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
TRIM47-206ENST00000592942 SALL3Q9BXA9 1300 aa18.66■□□□□ 0.58
TRIM47-206ENST00000592942 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
TRIM47-206ENST00000592942 FAM155AB1AL88 458 aaPredicted RBP18.65■□□□□ 0.58
TRIM47-206ENST00000592942 GOLIM4O00461 696 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 IDH1O75874 414 aaKnown RBP18.65■□□□□ 0.58
TRIM47-206ENST00000592942 TNNI2P48788 182 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 TCP10Q12799 353 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 PRKG1Q13976 671 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 TSHZ3Q63HK5 1081 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 FAM151AQ8WW52 585 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 DNAJC2Q99543 621 aaKnown RBP18.65■□□□□ 0.58
TRIM47-206ENST00000592942 DDX4Q9NQI0 724 aaKnown RBP18.65■□□□□ 0.58
TRIM47-206ENST00000592942 TMOD2Q9NZR1 351 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 RFX7Q2KHR2 1363 aa18.65■□□□□ 0.58
TRIM47-206ENST00000592942 PAPPA2Q9BXP8 1791 aa18.64■□□□□ 0.57
TRIM47-206ENST00000592942 NF2P35240 595 aa18.64■□□□□ 0.57
TRIM47-206ENST00000592942 RGMBQ6NW40 437 aa18.64■□□□□ 0.57
TRIM47-206ENST00000592942 MAGEB6Q8N7X4 407 aa18.64■□□□□ 0.57
TRIM47-206ENST00000592942 PAG1Q9NWQ8 432 aa18.64■□□□□ 0.57
TRIM47-206ENST00000592942 CYP7A1P22680 504 aa18.63■□□□□ 0.57
TRIM47-206ENST00000592942 RGS3P49796 1198 aa18.63■□□□□ 0.57
TRIM47-206ENST00000592942 MAP3K12Q12852 859 aa18.63■□□□□ 0.57
TRIM47-206ENST00000592942 TTF1Q15361 905 aaPredicted RBP18.63■□□□□ 0.57
TRIM47-206ENST00000592942 SH3BP5LQ7L8J4 393 aa18.63■□□□□ 0.57
TRIM47-206ENST00000592942 PI4K2BQ8TCG2 481 aa18.63■□□□□ 0.57
TRIM47-206ENST00000592942 SH3RF3Q8TEJ3 882 aaPredicted RBP18.63■□□□□ 0.57
TRIM47-206ENST00000592942 ZIC5Q96T25 663 aa18.63■□□□□ 0.57
TRIM47-206ENST00000592942 AATFQ9NY61 560 aaKnown RBP eCLIP18.63■□□□□ 0.57
TRIM47-206ENST00000592942 ANGEL1Q9UNK9 670 aaKnown RBP18.63■□□□□ 0.57
TRIM47-206ENST00000592942 DOCK2Q92608 1830 aa18.63■□□□□ 0.57
TRIM47-206ENST00000592942 TCRBV5S4A2TA0A5A2 114 aa18.62■□□□□ 0.57
TRIM47-206ENST00000592942 AOC2O75106 756 aa18.62■□□□□ 0.57
TRIM47-206ENST00000592942 ENTPD3O75355 529 aa18.62■□□□□ 0.57
TRIM47-206ENST00000592942 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
TRIM47-206ENST00000592942 MAP4K4O95819 1239 aaPredicted RBP18.62■□□□□ 0.57
TRIM47-206ENST00000592942 ECE1P42892 770 aa18.62■□□□□ 0.57
TRIM47-206ENST00000592942 DYNLL1P63167 89 aaKnown RBP18.62■□□□□ 0.57
TRIM47-206ENST00000592942 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
TRIM47-206ENST00000592942 ARMC9Q7Z3E5 817 aa18.62■□□□□ 0.57
TRIM47-206ENST00000592942 PPP1R12BO60237 982 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-206ENST00000592942 CHGBP05060 677 aa18.61■□□□□ 0.57
TRIM47-206ENST00000592942 ZNF157P51786 506 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-206ENST00000592942 TTLL12Q14166 644 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-206ENST00000592942 B4GALNT3Q6L9W6 998 aa18.61■□□□□ 0.57
TRIM47-206ENST00000592942 RPAP1Q9BWH6 1393 aaPredicted RBP18.6■□□□□ 0.57
TRIM47-206ENST00000592942 TTC41PQ6P2S7 1318 aa18.6■□□□□ 0.57
TRIM47-206ENST00000592942 DDTLA6NHG4 134 aaPredicted RBP18.6■□□□□ 0.57
TRIM47-206ENST00000592942 BAG3O95817 575 aa18.6■□□□□ 0.57
TRIM47-206ENST00000592942 PDE6AP16499 860 aa18.6■□□□□ 0.57
TRIM47-206ENST00000592942 NUCB1Q02818 461 aa18.6■□□□□ 0.57
TRIM47-206ENST00000592942 SLC9C2Q5TAH2 1124 aa18.6■□□□□ 0.57
TRIM47-206ENST00000592942 TMED8Q6PL24 325 aaPredicted RBP18.6■□□□□ 0.57
TRIM47-206ENST00000592942 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
TRIM47-206ENST00000592942 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
TRIM47-206ENST00000592942 SLC10A3P09131 477 aa18.59■□□□□ 0.57
TRIM47-206ENST00000592942 SLURP2P0DP57 97 aa18.59■□□□□ 0.57
TRIM47-206ENST00000592942 MAP2K2P36507 400 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms