RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 DZIP1Q86YF9 867 aaKnown RBP24.4■■□□□ 1.5
TNFRSF11A-204ENST00000592013 SPDYE5A6NIY4 337 aa24.39■■□□□ 1.49
TNFRSF11A-204ENST00000592013 CACNB3P54284 484 aa24.39■■□□□ 1.49
TNFRSF11A-204ENST00000592013 GORABQ5T7V8 394 aa24.39■■□□□ 1.49
TNFRSF11A-204ENST00000592013 OTUD5Q96G74 571 aa24.39■■□□□ 1.49
TNFRSF11A-204ENST00000592013 ZFYVE28Q9HCC9 887 aa24.39■■□□□ 1.49
TNFRSF11A-204ENST00000592013 PA2G4Q9UQ80 394 aaKnown RBP24.39■■□□□ 1.49
TNFRSF11A-204ENST00000592013 DAGLAQ9Y4D2 1042 aa24.39■■□□□ 1.49
TNFRSF11A-204ENST00000592013 PHKA1P46020 1223 aa24.38■■□□□ 1.49
TNFRSF11A-204ENST00000592013 G3BP1Q13283 466 aaKnown RBP eCLIP24.38■■□□□ 1.49
TNFRSF11A-204ENST00000592013 SNAPC2Q13487 334 aa24.38■■□□□ 1.49
TNFRSF11A-204ENST00000592013 CCL15-CCL14A0A0B4J2E2 113 aa24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 A0A1B0GUL7 405 aa24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 PRDX5P30044 214 aa24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 HNRNPUQ00839 825 aaKnown RBP eCLIP24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 CRHR2Q13324 411 aa24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 CCL15Q16663 113 aa24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 USP40Q9NVE5 1235 aa24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 TRIM17Q9Y577 477 aa24.37■■□□□ 1.49
TNFRSF11A-204ENST00000592013 GJA5P36382 358 aa24.36■■□□□ 1.49
TNFRSF11A-204ENST00000592013 SP3Q02447 781 aa24.36■■□□□ 1.49
TNFRSF11A-204ENST00000592013 PPATQ06203 517 aa24.36■■□□□ 1.49
TNFRSF11A-204ENST00000592013 CDC42EP5Q6NZY7 148 aa24.36■■□□□ 1.49
TNFRSF11A-204ENST00000592013 FTSJ3Q8IY81 847 aaKnown RBP24.36■■□□□ 1.49
TNFRSF11A-204ENST00000592013 MS4A4AQ96JQ5 239 aa24.36■■□□□ 1.49
TNFRSF11A-204ENST00000592013 OTOFQ9HC10 1997 aa24.36■■□□□ 1.49
TNFRSF11A-204ENST00000592013 GSTO1P78417 241 aa24.35■■□□□ 1.49
TNFRSF11A-204ENST00000592013 PPIL2Q13356 520 aa24.35■■□□□ 1.49
TNFRSF11A-204ENST00000592013 TAF1CQ15572 869 aaPredicted RBP24.35■■□□□ 1.49
TNFRSF11A-204ENST00000592013 DIXDC1Q155Q3 683 aa24.35■■□□□ 1.49
TNFRSF11A-204ENST00000592013 CDAN1Q8IWY9 1227 aa24.35■■□□□ 1.49
TNFRSF11A-204ENST00000592013 NEUROD6Q96NK8 337 aa24.35■■□□□ 1.49
TNFRSF11A-204ENST00000592013 ABCF2Q9UG63 623 aa24.35■■□□□ 1.49
TNFRSF11A-204ENST00000592013 ENTPD3O75355 529 aa24.34■■□□□ 1.49
TNFRSF11A-204ENST00000592013 MAP4K4O95819 1239 aaPredicted RBP24.34■■□□□ 1.49
TNFRSF11A-204ENST00000592013 SOX10P56693 466 aa24.34■■□□□ 1.49
TNFRSF11A-204ENST00000592013 TIMM10P62072 90 aa24.34■■□□□ 1.49
TNFRSF11A-204ENST00000592013 TFCP2Q12800 502 aa24.34■■□□□ 1.49
TNFRSF11A-204ENST00000592013 XAGE2Q96GT9 111 aa24.34■■□□□ 1.49
TNFRSF11A-204ENST00000592013 BCAR3O75815 825 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 LDHCP07864 332 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 RASGRF1Q13972 1273 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 KIF22Q14807 665 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 DIEXFQ68CQ4 756 aaKnown RBP24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 ERICH6Q7L0X2 663 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 BRI3BPQ8WY22 251 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 CLUAP1Q96AJ1 413 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 FAM163AQ96GL9 167 aaPredicted RBP24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 PTPN18Q99952 460 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 R3HDMLQ9H3Y0 253 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 EFCC1Q9HA90 598 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 SNCAIPQ9Y6H5 919 aa24.33■■□□□ 1.49
TNFRSF11A-204ENST00000592013 UQCRFS1P1P0C7P4 283 aa24.32■■□□□ 1.48
TNFRSF11A-204ENST00000592013 TCP10Q12799 353 aa24.32■■□□□ 1.48
TNFRSF11A-204ENST00000592013 OTOP1Q7RTM1 612 aa24.32■■□□□ 1.48
TNFRSF11A-204ENST00000592013 IDI2Q9BXS1 227 aa24.32■■□□□ 1.48
TNFRSF11A-204ENST00000592013 GAKO14976 1311 aa24.32■■□□□ 1.48
TNFRSF11A-204ENST00000592013 IGSF3O75054 1194 aa24.31■■□□□ 1.48
TNFRSF11A-204ENST00000592013 ADORA1P30542 326 aa24.31■■□□□ 1.48
TNFRSF11A-204ENST00000592013 ZKSCAN4Q969J2 545 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF11A-204ENST00000592013 OS9Q13438 667 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF11A-204ENST00000592013 MIGA2Q7L4E1 593 aa24.3■■□□□ 1.48
TNFRSF11A-204ENST00000592013 ZSCAN29Q8IWY8 852 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF11A-204ENST00000592013 ZNF112Q9UJU3 913 aa24.3■■□□□ 1.48
TNFRSF11A-204ENST00000592013 GNRH1P01148 92 aa24.29■■□□□ 1.48
TNFRSF11A-204ENST00000592013 NOL9Q5SY16 702 aaKnown RBP24.29■■□□□ 1.48
TNFRSF11A-204ENST00000592013 SPATA5Q8NB90 893 aa24.29■■□□□ 1.48
TNFRSF11A-204ENST00000592013 NOL10Q9BSC4 688 aaKnown RBP24.29■■□□□ 1.48
TNFRSF11A-204ENST00000592013 GPR108Q9NPR9 543 aa24.29■■□□□ 1.48
TNFRSF11A-204ENST00000592013 PICK1Q9NRD5 415 aa24.29■■□□□ 1.48
TNFRSF11A-204ENST00000592013 IRF6O14896 467 aa24.28■■□□□ 1.48
TNFRSF11A-204ENST00000592013 CD99L2Q8TCZ2 262 aa24.28■■□□□ 1.48
TNFRSF11A-204ENST00000592013 CNKSR2Q8WXI2 1034 aa24.28■■□□□ 1.48
TNFRSF11A-204ENST00000592013 PTPN22Q9Y2R2 807 aa24.28■■□□□ 1.48
TNFRSF11A-204ENST00000592013 MROH7-TTC4A0A0A0MT08 1334 aa24.28■■□□□ 1.48
TNFRSF11A-204ENST00000592013 TLR2O60603 784 aa24.27■■□□□ 1.48
TNFRSF11A-204ENST00000592013 MS4A1P11836 297 aa24.27■■□□□ 1.48
TNFRSF11A-204ENST00000592013 NFIAQ12857 509 aa24.27■■□□□ 1.48
TNFRSF11A-204ENST00000592013 CCDC158Q5M9N0 1113 aa24.27■■□□□ 1.48
TNFRSF11A-204ENST00000592013 NBPF11Q86T75 865 aa24.27■■□□□ 1.48
TNFRSF11A-204ENST00000592013 TMEM57Q8N5G2 664 aa24.27■■□□□ 1.48
TNFRSF11A-204ENST00000592013 FAM198AQ9UFP1 575 aa24.27■■□□□ 1.48
TNFRSF11A-204ENST00000592013 AK9Q5TCS8 1911 aa24.26■■□□□ 1.47
TNFRSF11A-204ENST00000592013 NPM3O75607 178 aaKnown RBP24.26■■□□□ 1.47
TNFRSF11A-204ENST00000592013 RGS3P49796 1198 aa24.26■■□□□ 1.47
TNFRSF11A-204ENST00000592013 FAM43AQ8N2R8 423 aa24.26■■□□□ 1.47
TNFRSF11A-204ENST00000592013 CXCL11O14625 94 aa24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 ARID4AP29374 1257 aaPredicted RBP24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 BTDP43251 543 aa24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 PRMT2P55345 433 aa24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 ANKRD23Q86SG2 305 aa24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 ITPRIPQ8IWB1 547 aa24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 MIER1Q8N108 512 aa24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 KCNH4Q9UQ05 1017 aa24.25■■□□□ 1.47
TNFRSF11A-204ENST00000592013 MYH2Q9UKX2 1941 aa24.24■■□□□ 1.47
TNFRSF11A-204ENST00000592013 GPR75-ASB3A0A0A6YYF3 556 aa24.24■■□□□ 1.47
TNFRSF11A-204ENST00000592013 PNMA6EA0A0J9YXQ4 647 aa24.24■■□□□ 1.47
TNFRSF11A-204ENST00000592013 BTBD19C9JJ37 291 aa24.24■■□□□ 1.47
TNFRSF11A-204ENST00000592013 INPP5BP32019 993 aa24.24■■□□□ 1.47
TNFRSF11A-204ENST00000592013 ATP8B2P98198 1209 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms