RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 JAK2O60674 1132 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 CTDNEP1O95476 244 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
VPS25-206ENST00000591584 PPARAQ07869 468 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 AMIGO3Q86WK7 504 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
VPS25-206ENST00000591584 IGDCC4Q8TDY8 1250 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 WASF1Q92558 559 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 ESR2Q92731 530 aa12.16□□□□□ -0.46
VPS25-206ENST00000591584 RIOK1Q9BRS2 568 aaKnown RBP12.16□□□□□ -0.46
VPS25-206ENST00000591584 CRNKL1Q9BZJ0 848 aaKnown RBP12.16□□□□□ -0.46
VPS25-206ENST00000591584 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
VPS25-206ENST00000591584 NAP1L2Q9ULW6 460 aaPredicted RBP12.16□□□□□ -0.46
VPS25-206ENST00000591584 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 A0A0G2JLW4 131 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 CCDC69A6NI79 296 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 ZBTB43O43298 467 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 FGRP09769 529 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
VPS25-206ENST00000591584 RESTQ13127 1097 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 NBPF3Q9H094 633 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 SLC12A7Q9Y666 1083 aa12.15□□□□□ -0.46
VPS25-206ENST00000591584 B4E1Z4 1266 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
VPS25-206ENST00000591584 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
VPS25-206ENST00000591584 FIBPO43427 364 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 BAG3O95817 575 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 RXRBP28702 533 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 ALDH1B1P30837 517 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 CYB5R4Q7L1T6 521 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 SP8Q8IXZ3 490 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 SPATA32Q96LK8 384 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 NID2Q14112 1375 aa12.14□□□□□ -0.47
VPS25-206ENST00000591584 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 PRKAB2O43741 272 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 KDM4AO75164 1064 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 PDE6BP35913 854 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 PPP4CP60510 307 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 MECOMQ03112 1051 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 FOXD4L6Q3SYB3 417 aaPredicted RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 APOA5Q6Q788 366 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 PROM2Q8N271 834 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 TBC1D22AQ8WUA7 517 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 C8orf76Q96K31 380 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 NOL10Q9BSC4 688 aaKnown RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 TMX4Q9H1E5 349 aaPredicted RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 LY9Q9HBG7 655 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 ORC3Q9UBD5 711 aaPredicted RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
VPS25-206ENST00000591584 C4AP0C0L4 1744 aa12.13□□□□□ -0.47
VPS25-206ENST00000591584 NEDD4P46934 1319 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 APBA3O96018 575 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
VPS25-206ENST00000591584 CALM1P0DP23 149 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 CALM2P0DP24 149 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 CALM3P0DP25 149 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 FDPSP14324 419 aaKnown RBP12.12□□□□□ -0.47
VPS25-206ENST00000591584 IL1R1P14778 569 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 NASPP49321 788 aaPredicted RBP12.12□□□□□ -0.47
VPS25-206ENST00000591584 CTDSPL2Q05D32 466 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 WTAPQ15007 396 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 FERMT3Q86UX7 667 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 AMOTL1Q8IY63 956 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
VPS25-206ENST00000591584 UBAC1Q9BSL1 405 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 TSPY26PQ9H489 355 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 DDX19AQ9NUU7 478 aaKnown RBP12.12□□□□□ -0.47
VPS25-206ENST00000591584 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
VPS25-206ENST00000591584 TIAM2Q8IVF5 1701 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms