RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ZDHHC1Q8WTX9 485 aa10.95□□□□□ -0.66
DNMT1-219ENST00000589349 SCG3Q8WXD2 468 aaKnown RBP10.95□□□□□ -0.66
DNMT1-219ENST00000589349 RTCBQ9Y3I0 505 aaKnown RBP10.95□□□□□ -0.66
DNMT1-219ENST00000589349 PARP3Q9Y6F1 533 aa10.95□□□□□ -0.66
DNMT1-219ENST00000589349 CASZ1Q86V15 1759 aa10.95□□□□□ -0.66
DNMT1-219ENST00000589349 NEFMP07197 916 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 ATP4AP20648 1035 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 RFC4P35249 363 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 HIRAP54198 1017 aaPredicted RBP10.94□□□□□ -0.66
DNMT1-219ENST00000589349 SWI5Q1ZZU3 235 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
DNMT1-219ENST00000589349 STAG2Q8N3U4 1231 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 TRERF1Q96PN7 1200 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 RUBCNLQ9H714 662 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 LGR6Q9HBX8 967 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 WWC3Q9ULE0 1092 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 ZMIZ1Q9ULJ6 1067 aa10.94□□□□□ -0.66
DNMT1-219ENST00000589349 PKD1L3Q7Z443 1732 aa10.93□□□□□ -0.66
DNMT1-219ENST00000589349 IGFBP4P22692 258 aa10.93□□□□□ -0.66
DNMT1-219ENST00000589349 TEFQ10587 303 aa10.93□□□□□ -0.66
DNMT1-219ENST00000589349 ARSJQ5FYB0 599 aaPredicted RBP10.93□□□□□ -0.66
DNMT1-219ENST00000589349 TTC5Q8N0Z6 440 aa10.93□□□□□ -0.66
DNMT1-219ENST00000589349 PAPPAQ13219 1627 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 EML1O00423 815 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 RNMTO43148 476 aaKnown RBP10.92□□□□□ -0.66
DNMT1-219ENST00000589349 SSFA2P28290 1259 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 PPP2R1AP30153 589 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 PRKAR2BP31323 418 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 SLC39A6Q13433 755 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 GPR161Q8N6U8 529 aaKnown RBP10.92□□□□□ -0.66
DNMT1-219ENST00000589349 RTF1Q92541 710 aaKnown RBP10.92□□□□□ -0.66
DNMT1-219ENST00000589349 GTPBP3Q969Y2 492 aaKnown RBP10.92□□□□□ -0.66
DNMT1-219ENST00000589349 GPC6Q9Y625 555 aaPredicted RBP10.92□□□□□ -0.66
DNMT1-219ENST00000589349 ITGB4P16144 1822 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 LY75O60449 1722 aa10.92□□□□□ -0.66
DNMT1-219ENST00000589349 GNAT3A8MTJ3 354 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 C21orf2O43822 256 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 TXLNAP40222 546 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 BICDL1Q6ZP65 573 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 NLRP8Q86W28 1048 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 AMIGO3Q86WK7 504 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 NLGN2Q8NFZ4 835 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 COL25A1Q9BXS0 654 aaPredicted RBP10.91□□□□□ -0.66
DNMT1-219ENST00000589349 SLC52A2Q9HAB3 445 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 TOGARAM1Q9Y4F4 1720 aa10.91□□□□□ -0.66
DNMT1-219ENST00000589349 KDM6AO15550 1401 aaPredicted RBP10.91□□□□□ -0.66
DNMT1-219ENST00000589349 C5P01031 1676 aa10.9□□□□□ -0.66
DNMT1-219ENST00000589349 DDX10Q13206 875 aaKnown RBP10.9□□□□□ -0.66
DNMT1-219ENST00000589349 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
DNMT1-219ENST00000589349 FIGNL1Q6PIW4 674 aa10.9□□□□□ -0.66
DNMT1-219ENST00000589349 NPM2Q86SE8 214 aaKnown RBP10.9□□□□□ -0.66
DNMT1-219ENST00000589349 STK32AQ8WU08 396 aa10.9□□□□□ -0.66
DNMT1-219ENST00000589349 C2orf49Q9BVC5 232 aaPredicted RBP10.9□□□□□ -0.66
DNMT1-219ENST00000589349 PHF24Q9UPV7 400 aa10.9□□□□□ -0.66
DNMT1-219ENST00000589349 KDRP35968 1356 aa10.9□□□□□ -0.67
DNMT1-219ENST00000589349 NPC1L1Q9UHC9 1359 aa10.9□□□□□ -0.67
DNMT1-219ENST00000589349 A0A1W2PNR3 127 aa10.89□□□□□ -0.67
DNMT1-219ENST00000589349 MMP10P09238 476 aa10.89□□□□□ -0.67
DNMT1-219ENST00000589349 CRKLP46109 303 aaKnown RBP10.89□□□□□ -0.67
DNMT1-219ENST00000589349 DNAJC10Q8IXB1 793 aa10.89□□□□□ -0.67
DNMT1-219ENST00000589349 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
DNMT1-219ENST00000589349 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
DNMT1-219ENST00000589349 PLEKHG2Q9H7P9 1386 aa10.89□□□□□ -0.67
DNMT1-219ENST00000589349 RPS6KA4O75676 772 aa10.88□□□□□ -0.67
DNMT1-219ENST00000589349 CANXP27824 592 aaKnown RBP10.88□□□□□ -0.67
DNMT1-219ENST00000589349 WEE1P30291 646 aa10.88□□□□□ -0.67
DNMT1-219ENST00000589349 INSM1Q01101 510 aaPredicted RBP10.88□□□□□ -0.67
DNMT1-219ENST00000589349 SH3PXD2AQ5TCZ1 1133 aa10.88□□□□□ -0.67
DNMT1-219ENST00000589349 NLGN1Q8N2Q7 840 aa10.88□□□□□ -0.67
DNMT1-219ENST00000589349 ZIC5Q96T25 663 aa10.88□□□□□ -0.67
DNMT1-219ENST00000589349 GPR25O00155 361 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 LGR5O75473 907 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 THBS1P07996 1170 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 TMEM164Q5U3C3 297 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 RHPN1Q8TCX5 695 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 PHACTR3Q96KR7 559 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 ARID3AQ99856 593 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 CFHR5Q9BXR6 569 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 PHACTR1Q9C0D0 580 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 HCN4Q9Y3Q4 1203 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 CD2APQ9Y5K6 639 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 MAP3K5Q99683 1374 aa10.87□□□□□ -0.67
DNMT1-219ENST00000589349 CNTNAP4Q9C0A0 1308 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 BTBD11A6QL63 1104 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 GRIN3BO60391 1043 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 STARD3NLO95772 234 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 VTI1AQ96AJ9 217 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 CNTNAP3BQ96NU0 1288 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 CNTNAP3Q9BZ76 1288 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 NEUROD4Q9HD90 331 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 SRP68Q9UHB9 627 aaKnown RBP10.86□□□□□ -0.67
DNMT1-219ENST00000589349 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
DNMT1-219ENST00000589349 NPHP1O15259 732 aa10.85□□□□□ -0.67
DNMT1-219ENST00000589349 MCM10Q7L590 875 aa10.85□□□□□ -0.67
DNMT1-219ENST00000589349 IL17REQ8NFR9 667 aa10.85□□□□□ -0.67
DNMT1-219ENST00000589349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.85□□□□□ -0.67
DNMT1-219ENST00000589349 ATXN7L1Q9ULK2 861 aaPredicted RBP10.85□□□□□ -0.67
DNMT1-219ENST00000589349 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
DNMT1-219ENST00000589349 KRT76Q01546 638 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms