RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 NETO1Q8TDF5 533 aa6.44□□□□□ -1.38
SMAD4-207ENST00000589076 SLC38A3Q99624 504 aa6.44□□□□□ -1.38
SMAD4-207ENST00000589076 ATXN3LQ9H3M9 355 aa6.44□□□□□ -1.38
SMAD4-207ENST00000589076 LGR6Q9HBX8 967 aa6.44□□□□□ -1.38
SMAD4-207ENST00000589076 C1GALT1Q9NS00 363 aa6.44□□□□□ -1.38
SMAD4-207ENST00000589076 COL19A1Q14993 1142 aa6.43□□□□□ -1.38
SMAD4-207ENST00000589076 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
SMAD4-207ENST00000589076 TCF12Q99081 682 aa6.43□□□□□ -1.38
SMAD4-207ENST00000589076 GSX1Q9H4S2 264 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-207ENST00000589076 CCDC87Q9NVE4 849 aa6.43□□□□□ -1.38
SMAD4-207ENST00000589076 PAPLNO95428 1278 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 CTSBP07858 339 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 PTPN12Q05209 780 aaKnown RBP6.42□□□□□ -1.38
SMAD4-207ENST00000589076 PDE3BQ13370 1112 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 KIAA0319Q5VV43 1072 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 B4GALNT3Q6L9W6 998 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 SEZ6L2Q6UXD5 910 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 PI4K2BQ8TCG2 481 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 ZNF576Q9H609 170 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 RC3H2Q9HBD1 1191 aaKnown RBP6.42□□□□□ -1.38
SMAD4-207ENST00000589076 VAV3Q9UKW4 847 aa6.42□□□□□ -1.38
SMAD4-207ENST00000589076 ARID1BQ8NFD5 2236 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-207ENST00000589076 DBX1A6NMT0 343 aa6.41□□□□□ -1.38
SMAD4-207ENST00000589076 NDUFB5O43674 189 aa6.41□□□□□ -1.38
SMAD4-207ENST00000589076 FAM87AP0C7U9 286 aa6.41□□□□□ -1.38
SMAD4-207ENST00000589076 ZNF648Q5T619 568 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-207ENST00000589076 ZNF574Q6ZN55 896 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-207ENST00000589076 TRIM56Q9BRZ2 755 aaKnown RBP6.41□□□□□ -1.38
SMAD4-207ENST00000589076 WDR18Q9BV38 432 aa6.41□□□□□ -1.38
SMAD4-207ENST00000589076 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
SMAD4-207ENST00000589076 ANO2Q9NQ90 1003 aa6.41□□□□□ -1.38
SMAD4-207ENST00000589076 TMEM88BA6NKF7 163 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 DYNC1LI2O43237 492 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-207ENST00000589076 CPNE3O75131 537 aaKnown RBP6.4□□□□□ -1.38
SMAD4-207ENST00000589076 FUT4P22083 530 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 ITPKAP23677 461 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 ID3Q02535 119 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 PRKCQQ04759 706 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 ZNF211Q13398 564 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-207ENST00000589076 IFI16Q16666 785 aaKnown RBP6.4□□□□□ -1.38
SMAD4-207ENST00000589076 RPS26P11Q5JNZ5 115 aaPredicted RBP6.4□□□□□ -1.38
SMAD4-207ENST00000589076 TMEM40Q8WWA1 233 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 FAM168AQ92567 244 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 MKNK2Q9HBH9 465 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 SSU72Q9NP77 194 aaKnown RBP6.4□□□□□ -1.38
SMAD4-207ENST00000589076 PPP4R2Q9NY27 417 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 TRAK1Q9UPV9 953 aa6.4□□□□□ -1.38
SMAD4-207ENST00000589076 TMEM265A0A087WTH1 108 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 RNGTTO60942 597 aaKnown RBP6.39□□□□□ -1.39
SMAD4-207ENST00000589076 ECEL1O95672 775 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 PDIA4P13667 645 aaKnown RBP6.39□□□□□ -1.39
SMAD4-207ENST00000589076 PPP2R3AQ06190 1150 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 PDE4CQ08493 712 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 BNIP3Q12983 259 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 CDK5R2Q13319 367 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 SPRED2Q7Z698 418 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 SMYD4Q8IYR2 804 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-207ENST00000589076 PLD6Q8N2A8 252 aaKnown RBP6.39□□□□□ -1.39
SMAD4-207ENST00000589076 HRASLS5Q96KN8 279 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 CRIM1Q9NZV1 1036 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 EGFL7Q9UHF1 273 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 PPP1R9AQ9ULJ8 1098 aa6.39□□□□□ -1.39
SMAD4-207ENST00000589076 TMPRSS2O15393 492 aa6.38□□□□□ -1.39
SMAD4-207ENST00000589076 GADD45BO75293 160 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-207ENST00000589076 ANGEL2Q5VTE6 544 aaKnown RBP6.38□□□□□ -1.39
SMAD4-207ENST00000589076 GLYCTKQ8IVS8 523 aa6.38□□□□□ -1.39
SMAD4-207ENST00000589076 PCOLCE2Q9UKZ9 415 aa6.38□□□□□ -1.39
SMAD4-207ENST00000589076 CD8BP10966 210 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 LIG1P18858 919 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 ZNF124Q15973 351 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 AOC3Q16853 763 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 FAM181AQ8N9Y4 354 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 TMC1Q8TDI8 760 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 FANCD2OSQ96PS1 177 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 NPHS2Q9NP85 383 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 KRT82Q9NSB4 513 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 FAM53CQ9NYF3 392 aa6.37□□□□□ -1.39
SMAD4-207ENST00000589076 RNASE1P07998 156 aaKnown RBP6.36□□□□□ -1.39
SMAD4-207ENST00000589076 GLIS3Q8NEA6 775 aa6.36□□□□□ -1.39
SMAD4-207ENST00000589076 CITED4Q96RK1 184 aa6.36□□□□□ -1.39
SMAD4-207ENST00000589076 DNAJC25Q9H1X3 360 aa6.36□□□□□ -1.39
SMAD4-207ENST00000589076 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
SMAD4-207ENST00000589076 H3BRB1 525 aa6.35□□□□□ -1.39
SMAD4-207ENST00000589076 ICMTO60725 284 aa6.35□□□□□ -1.39
SMAD4-207ENST00000589076 CEACAM5P06731 702 aa6.35□□□□□ -1.39
SMAD4-207ENST00000589076 GSTP1P09211 210 aaKnown RBP6.35□□□□□ -1.39
SMAD4-207ENST00000589076 USPL1Q5W0Q7 1092 aa6.35□□□□□ -1.39
SMAD4-207ENST00000589076 PRPF40BQ6NWY9 871 aaKnown RBP6.35□□□□□ -1.39
SMAD4-207ENST00000589076 SLC23A3Q6PIS1 610 aa6.35□□□□□ -1.39
SMAD4-207ENST00000589076 TRAIPQ9BWF2 469 aa6.35□□□□□ -1.39
SMAD4-207ENST00000589076 ZC3H12CQ9C0D7 883 aaKnown RBP6.35□□□□□ -1.39
SMAD4-207ENST00000589076 TUT1Q9H6E5 874 aaKnown RBP6.35□□□□□ -1.39
SMAD4-207ENST00000589076 CCDC86Q9H6F5 360 aaKnown RBP6.35□□□□□ -1.39
SMAD4-207ENST00000589076 MBNL3Q9NUK0 354 aaKnown RBP6.35□□□□□ -1.39
SMAD4-207ENST00000589076 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.35□□□□□ -1.39
SMAD4-207ENST00000589076 CARMIL2Q6F5E8 1435 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 TTLL4Q14679 1199 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 DTHD1Q6ZMT9 781 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 RETREG2Q8NC44 543 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms