RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 NEFMP07197 916 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 CYP2C8P10632 490 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 CRKP46108 304 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 FLT3LGP49771 235 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 TNFAIP1Q13829 316 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 HELBQ8NG08 1087 aaPredicted RBP10.8□□□□□ -0.68
RETREG3-207ENST00000589007 TDRD7Q8NHU6 1098 aaKnown RBP10.8□□□□□ -0.68
RETREG3-207ENST00000589007 PXYLP1Q8TE99 480 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 ZNF112Q9UJU3 913 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 CSADQ9Y600 493 aa10.8□□□□□ -0.68
RETREG3-207ENST00000589007 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
RETREG3-207ENST00000589007 COL6A1P12109 1028 aa10.79□□□□□ -0.68
RETREG3-207ENST00000589007 IGHMBP2P38935 993 aaKnown RBP10.79□□□□□ -0.68
RETREG3-207ENST00000589007 UBXN2AP68543 259 aa10.79□□□□□ -0.68
RETREG3-207ENST00000589007 PPATQ06203 517 aa10.79□□□□□ -0.68
RETREG3-207ENST00000589007 TRIM32Q13049 653 aa10.79□□□□□ -0.68
RETREG3-207ENST00000589007 UBE3BQ7Z3V4 1068 aa10.79□□□□□ -0.68
RETREG3-207ENST00000589007 CCDC146Q8IYE0 955 aa10.79□□□□□ -0.68
RETREG3-207ENST00000589007 C8orf58Q8NAV2 365 aa10.79□□□□□ -0.68
RETREG3-207ENST00000589007 CHD7Q9P2D1 2997 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 PI4KAP2A4QPH2 592 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 COL9A1P20849 921 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 FOXO4P98177 505 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 MFSD14BQ5SR56 506 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 NOL9Q5SY16 702 aaKnown RBP10.78□□□□□ -0.68
RETREG3-207ENST00000589007 G2E3Q7L622 706 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 PI4KAP1Q8N8J0 262 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.78□□□□□ -0.68
RETREG3-207ENST00000589007 TTF2Q9UNY4 1162 aaKnown RBP10.78□□□□□ -0.68
RETREG3-207ENST00000589007 NCOR1O75376 2440 aa10.78□□□□□ -0.68
RETREG3-207ENST00000589007 FCGRTP55899 365 aa10.77□□□□□ -0.69
RETREG3-207ENST00000589007 APOBEC3HQ6NTF7 200 aaKnown RBP10.77□□□□□ -0.69
RETREG3-207ENST00000589007 KSR2Q6VAB6 950 aa10.77□□□□□ -0.69
RETREG3-207ENST00000589007 ZNF804AQ7Z570 1209 aa10.77□□□□□ -0.69
RETREG3-207ENST00000589007 FAM83AQ86UY5 434 aa10.77□□□□□ -0.69
RETREG3-207ENST00000589007 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
RETREG3-207ENST00000589007 LAS1LQ9Y4W2 734 aaKnown RBP10.77□□□□□ -0.69
RETREG3-207ENST00000589007 CAPN2P17655 700 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 HOXD10P28358 340 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 GCKRQ14397 625 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 EPHA10Q5JZY3 1008 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 NECAB2Q7Z6G3 386 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 PNNQ9H307 717 aaKnown RBP10.76□□□□□ -0.69
RETREG3-207ENST00000589007 OGDHLQ9ULD0 1010 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 MYH2Q9UKX2 1941 aa10.76□□□□□ -0.69
RETREG3-207ENST00000589007 A0A0G2JLL6 359 aaPredicted RBP10.75□□□□□ -0.69
RETREG3-207ENST00000589007 TFRCP02786 760 aaKnown RBP10.75□□□□□ -0.69
RETREG3-207ENST00000589007 GYG1P46976 350 aa10.75□□□□□ -0.69
RETREG3-207ENST00000589007 RBM5P52756 815 aaKnown RBP eCLIP10.75□□□□□ -0.69
RETREG3-207ENST00000589007 MAP3K21Q5TCX8 1036 aa10.75□□□□□ -0.69
RETREG3-207ENST00000589007 FKBP1CQ5VVH2 108 aa10.75□□□□□ -0.69
RETREG3-207ENST00000589007 PRRT2Q7Z6L0 340 aaPredicted RBP10.75□□□□□ -0.69
RETREG3-207ENST00000589007 FAM84BQ96KN1 310 aaPredicted RBP10.75□□□□□ -0.69
RETREG3-207ENST00000589007 FAM161BQ96MY7 647 aa10.75□□□□□ -0.69
RETREG3-207ENST00000589007 TTYH1Q9H313 450 aaPredicted RBP10.75□□□□□ -0.69
RETREG3-207ENST00000589007 CDK5RAP2Q96SN8 1893 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 ELL2O00472 640 aaPredicted RBP10.74□□□□□ -0.69
RETREG3-207ENST00000589007 SLURP2P0DP57 97 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 HOXD11P31277 338 aaPredicted RBP10.74□□□□□ -0.69
RETREG3-207ENST00000589007 PLA2G5P39877 138 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 LRRC26Q2I0M4 334 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 USP38Q8NB14 1042 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 ZNF594Q96JF6 807 aaPredicted RBP10.74□□□□□ -0.69
RETREG3-207ENST00000589007 ZDHHC15Q96MV8 337 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 PARK7Q99497 189 aaKnown RBP10.74□□□□□ -0.69
RETREG3-207ENST00000589007 MPHOSPH8Q99549 860 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 CDX2Q99626 313 aaPredicted RBP10.74□□□□□ -0.69
RETREG3-207ENST00000589007 UBE2OQ9C0C9 1292 aaKnown RBP10.74□□□□□ -0.69
RETREG3-207ENST00000589007 BIN2Q9UBW5 565 aaPredicted RBP10.74□□□□□ -0.69
RETREG3-207ENST00000589007 GJD2Q9UKL4 321 aa10.74□□□□□ -0.69
RETREG3-207ENST00000589007 PHF20L1A8MW92 1017 aa10.73□□□□□ -0.69
RETREG3-207ENST00000589007 KCNJ4P48050 445 aa10.73□□□□□ -0.69
RETREG3-207ENST00000589007 HDLBPQ00341 1268 aaKnown RBP10.73□□□□□ -0.69
RETREG3-207ENST00000589007 MIGA2Q7L4E1 593 aa10.73□□□□□ -0.69
RETREG3-207ENST00000589007 TRIB2Q92519 343 aa10.73□□□□□ -0.69
RETREG3-207ENST00000589007 ZNF341Q9BYN7 854 aa10.73□□□□□ -0.69
RETREG3-207ENST00000589007 C11orf49Q9H6J7 331 aa10.73□□□□□ -0.69
RETREG3-207ENST00000589007 IFT57Q9NWB7 429 aa10.73□□□□□ -0.69
RETREG3-207ENST00000589007 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.73□□□□□ -0.69
RETREG3-207ENST00000589007 TNNI2P48788 182 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 NFIAQ12857 509 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 MAFAQ8NHW3 353 aaPredicted RBP10.72□□□□□ -0.69
RETREG3-207ENST00000589007 RUNDC1Q96C34 613 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 NBPF3Q9H094 633 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 FAM198AQ9UFP1 575 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 SLC45A1Q9Y2W3 748 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 TRANK1O15050 2925 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 GBF1Q92538 1859 aa10.72□□□□□ -0.69
RETREG3-207ENST00000589007 ANKRD18BA2A2Z9 1011 aa10.71□□□□□ -0.69
RETREG3-207ENST00000589007 TNPO2O14787 897 aaKnown RBP10.71□□□□□ -0.69
RETREG3-207ENST00000589007 WDHD1O75717 1129 aaPredicted RBP10.71□□□□□ -0.69
RETREG3-207ENST00000589007 DDX58O95786 925 aaKnown RBP10.71□□□□□ -0.69
RETREG3-207ENST00000589007 HMGCRP04035 888 aa10.71□□□□□ -0.69
RETREG3-207ENST00000589007 MDM2Q00987 491 aaPredicted RBP10.71□□□□□ -0.69
RETREG3-207ENST00000589007 FOCADQ5VW36 1801 aa10.71□□□□□ -0.69
RETREG3-207ENST00000589007 FBXO33Q7Z6M2 555 aa10.71□□□□□ -0.69
RETREG3-207ENST00000589007 VGLL2Q8N8G2 317 aa10.71□□□□□ -0.69
RETREG3-207ENST00000589007 AFG3L2Q9Y4W6 797 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms