RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 SPATA31A5Q5VU36 1347 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 SPATA31A7Q8IWB4 1347 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 A0A1W2PNR3 127 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
ATG4D-210ENST00000588972 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 TRIM67Q6ZTA4 783 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 PRAM1Q96QH2 718 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 BCO2Q9BYV7 579 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 C14orf93Q9H972 538 aaKnown RBP10.69□□□□□ -0.7
ATG4D-210ENST00000588972 CNTN3Q9P232 1028 aa10.69□□□□□ -0.7
ATG4D-210ENST00000588972 PARD3Q8TEW0 1356 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 UTRNP46939 3433 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 EREGO14944 169 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 XYLBO75191 536 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 BMP2P12643 396 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 EPB42P16452 691 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 ARID5AQ03989 594 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 SAFB2Q14151 953 aaKnown RBP eCLIP10.68□□□□□ -0.7
ATG4D-210ENST00000588972 C1orf127Q8N9H9 656 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 DCAF11Q8TEB1 546 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 LNPKQ9C0E8 428 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 TIMMDC1Q9NPL8 285 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 CUEDC1Q9NWM3 386 aaPredicted RBP10.68□□□□□ -0.7
ATG4D-210ENST00000588972 RREB1Q92766 1687 aa10.68□□□□□ -0.7
ATG4D-210ENST00000588972 GADD45BO75293 160 aaPredicted RBP10.67□□□□□ -0.7
ATG4D-210ENST00000588972 EGFRP00533 1210 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 RHOQP17081 205 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 CANXP27824 592 aaKnown RBP10.67□□□□□ -0.7
ATG4D-210ENST00000588972 PRR20EP86478 221 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 PRR20CP86479 221 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 PRR20DP86480 221 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 PRR20BP86481 221 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 PRR20AP86496 221 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 FAM182BQ5T319 152 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 CEP63Q96MT8 703 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 ITSN1Q15811 1721 aa10.67□□□□□ -0.7
ATG4D-210ENST00000588972 PHRF1Q9P1Y6 1649 aaKnown RBP10.66□□□□□ -0.7
ATG4D-210ENST00000588972 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
ATG4D-210ENST00000588972 C6orf118Q5T5N4 469 aa10.66□□□□□ -0.7
ATG4D-210ENST00000588972 GIMAP6Q6P9H5 292 aa10.66□□□□□ -0.7
ATG4D-210ENST00000588972 ERMP1Q7Z2K6 904 aa10.66□□□□□ -0.7
ATG4D-210ENST00000588972 SUV39H2Q9H5I1 410 aa10.66□□□□□ -0.7
ATG4D-210ENST00000588972 ABI2Q9NYB9 513 aaPredicted RBP10.66□□□□□ -0.7
ATG4D-210ENST00000588972 POGKQ9P215 609 aa10.66□□□□□ -0.7
ATG4D-210ENST00000588972 NUP188Q5SRE5 1749 aa10.66□□□□□ -0.7
ATG4D-210ENST00000588972 GRM2Q14416 872 aa10.65□□□□□ -0.7
ATG4D-210ENST00000588972 EZH2Q15910 746 aaKnown RBP10.65□□□□□ -0.7
ATG4D-210ENST00000588972 PRDM11Q9NQV5 511 aa10.65□□□□□ -0.7
ATG4D-210ENST00000588972 ATP7BP35670 1465 aa10.65□□□□□ -0.7
ATG4D-210ENST00000588972 POTECB2RU33 542 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 GJA8P48165 433 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 FAM196AQ6ZSG2 479 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 CAMKK2Q96RR4 588 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 COPRSQ9NQ92 184 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 GJA3Q9Y6H8 435 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 KIAA1210Q9ULL0 1709 aa10.64□□□□□ -0.71
ATG4D-210ENST00000588972 SPATA31A1Q5TZJ5 1347 aa10.63□□□□□ -0.71
ATG4D-210ENST00000588972 PRR36Q9H6K5 1346 aa10.63□□□□□ -0.71
ATG4D-210ENST00000588972 VEGFBP49765 207 aa10.63□□□□□ -0.71
ATG4D-210ENST00000588972 MRPL14Q6P1L8 145 aaKnown RBP10.63□□□□□ -0.71
ATG4D-210ENST00000588972 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
ATG4D-210ENST00000588972 HIRIP3Q9BW71 556 aaPredicted RBP10.63□□□□□ -0.71
ATG4D-210ENST00000588972 CRISPLD1Q9H336 500 aa10.63□□□□□ -0.71
ATG4D-210ENST00000588972 C11orf16Q9NQ32 467 aa10.63□□□□□ -0.71
ATG4D-210ENST00000588972 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
ATG4D-210ENST00000588972 TRPM1Q7Z4N2 1603 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 TRIM37O94972 964 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 YY1P25490 414 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 PAK2Q13177 524 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 MCF2L2Q86YR7 1114 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 GLIS3Q8NEA6 775 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 NGDNQ8NEJ9 315 aaKnown RBP10.62□□□□□ -0.71
ATG4D-210ENST00000588972 PMEPA1Q969W9 287 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 RUBCNLQ9H714 662 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
ATG4D-210ENST00000588972 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
ATG4D-210ENST00000588972 NRKQ7Z2Y5 1582 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 SSH2Q76I76 1423 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 TTLL8A6PVC2 850 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 APBA3O96018 575 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 FGRP09769 529 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 CES1P23141 567 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 GSTT1P30711 240 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 RBL2Q08999 1139 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 TTC39BQ5VTQ0 682 aaPredicted RBP10.61□□□□□ -0.71
ATG4D-210ENST00000588972 KIAA0319Q5VV43 1072 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 ZCCHC2Q9C0B9 1178 aaKnown RBP10.61□□□□□ -0.71
ATG4D-210ENST00000588972 GPAMQ9HCL2 828 aa10.61□□□□□ -0.71
ATG4D-210ENST00000588972 TOPAZ1Q8N9V7 1692 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 CYP2E1P05181 493 aaPredicted RBP10.6□□□□□ -0.71
ATG4D-210ENST00000588972 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 SAMD5Q5TGI4 173 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 NOP9Q86U38 636 aaKnown RBP10.6□□□□□ -0.71
ATG4D-210ENST00000588972 NLRP8Q86W28 1048 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 C3orf58Q8NDZ4 430 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 NOC4LQ9BVI4 516 aaKnown RBP10.6□□□□□ -0.71
ATG4D-210ENST00000588972 TTF2Q9UNY4 1162 aaKnown RBP10.6□□□□□ -0.71
ATG4D-210ENST00000588972 TRAK1Q9UPV9 953 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms