RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NBPF9Q3BBW0 867 aa24.15■■□□□ 1.46
DNMT1-216ENST00000588952 TMED8Q6PL24 325 aaPredicted RBP24.15■■□□□ 1.46
DNMT1-216ENST00000588952 TICAM2Q86XR7 235 aa24.15■■□□□ 1.46
DNMT1-216ENST00000588952 RIOK1Q9BRS2 568 aaKnown RBP24.15■■□□□ 1.46
DNMT1-216ENST00000588952 TAF1DQ9H5J8 278 aaPredicted RBP24.15■■□□□ 1.46
DNMT1-216ENST00000588952 RRAGCQ9HB90 399 aa24.15■■□□□ 1.46
DNMT1-216ENST00000588952 NMRK2Q9NPI5 230 aa24.15■■□□□ 1.46
DNMT1-216ENST00000588952 ADARB2Q9NS39 739 aaKnown RBP24.15■■□□□ 1.46
DNMT1-216ENST00000588952 WNT10BO00744 389 aa24.14■■□□□ 1.45
DNMT1-216ENST00000588952 RHBDL3P58872 404 aa24.14■■□□□ 1.45
DNMT1-216ENST00000588952 CCDC129Q6ZRS4 1044 aa24.14■■□□□ 1.45
DNMT1-216ENST00000588952 DIAPH3Q9NSV4 1193 aa24.14■■□□□ 1.45
DNMT1-216ENST00000588952 MBD4O95243 580 aa24.13■■□□□ 1.45
DNMT1-216ENST00000588952 PPP4CP60510 307 aa24.13■■□□□ 1.45
DNMT1-216ENST00000588952 CDC42EP5Q6NZY7 148 aa24.13■■□□□ 1.45
DNMT1-216ENST00000588952 CWC27Q6UX04 472 aaKnown RBP24.13■■□□□ 1.45
DNMT1-216ENST00000588952 LCORLQ8N3X6 602 aa24.13■■□□□ 1.45
DNMT1-216ENST00000588952 ARMT1Q9H993 441 aa24.13■■□□□ 1.45
DNMT1-216ENST00000588952 MAGEB6P1A0A0J9YX57 407 aa24.12■■□□□ 1.45
DNMT1-216ENST00000588952 IQCA1LA6NCM1 817 aa24.12■■□□□ 1.45
DNMT1-216ENST00000588952 HIP1O00291 1037 aa24.12■■□□□ 1.45
DNMT1-216ENST00000588952 CDC45O75419 566 aa24.12■■□□□ 1.45
DNMT1-216ENST00000588952 ZNF589Q86UQ0 364 aaPredicted RBP24.12■■□□□ 1.45
DNMT1-216ENST00000588952 SH3RF3Q8TEJ3 882 aaPredicted RBP24.12■■□□□ 1.45
DNMT1-216ENST00000588952 TDRD3Q9H7E2 651 aaKnown RBP24.12■■□□□ 1.45
DNMT1-216ENST00000588952 CLRN2A0PK11 232 aa24.11■■□□□ 1.45
DNMT1-216ENST00000588952 HELLSQ9NRZ9 838 aa24.11■■□□□ 1.45
DNMT1-216ENST00000588952 ECM29Q5VYK3 1845 aa24.1■■□□□ 1.45
DNMT1-216ENST00000588952 GPAA1O43292 621 aa24.1■■□□□ 1.45
DNMT1-216ENST00000588952 CACNB3P54284 484 aa24.1■■□□□ 1.45
DNMT1-216ENST00000588952 SPDYE2Q495Y8 402 aa24.1■■□□□ 1.45
DNMT1-216ENST00000588952 USP40Q9NVE5 1235 aa24.1■■□□□ 1.45
DNMT1-216ENST00000588952 ZNF70Q9UC06 446 aaPredicted RBP24.1■■□□□ 1.45
DNMT1-216ENST00000588952 CDK5RAP2Q96SN8 1893 aa24.09■■□□□ 1.45
DNMT1-216ENST00000588952 BAG3O95817 575 aa24.09■■□□□ 1.45
DNMT1-216ENST00000588952 POTEIP0CG38 1075 aa24.09■■□□□ 1.45
DNMT1-216ENST00000588952 POTEJP0CG39 1038 aa24.09■■□□□ 1.45
DNMT1-216ENST00000588952 VEGFAP15692 232 aaPredicted RBP24.09■■□□□ 1.45
DNMT1-216ENST00000588952 MCMDC2Q4G0Z9 681 aa24.09■■□□□ 1.45
DNMT1-216ENST00000588952 USP50Q70EL3 339 aaPredicted RBP24.09■■□□□ 1.45
DNMT1-216ENST00000588952 AIDAQ96BJ3 306 aa24.09■■□□□ 1.45
DNMT1-216ENST00000588952 STRBPQ96SI9 672 aaKnown RBP24.09■■□□□ 1.45
DNMT1-216ENST00000588952 NOL10Q9BSC4 688 aaKnown RBP24.09■■□□□ 1.45
DNMT1-216ENST00000588952 PRKAB2O43741 272 aa24.08■■□□□ 1.45
DNMT1-216ENST00000588952 YY1P25490 414 aa24.08■■□□□ 1.45
DNMT1-216ENST00000588952 FOXP2O15409 715 aa24.07■■□□□ 1.44
DNMT1-216ENST00000588952 SGSM2O43147 1006 aa24.07■■□□□ 1.44
DNMT1-216ENST00000588952 WDHD1O75717 1129 aaPredicted RBP24.07■■□□□ 1.44
DNMT1-216ENST00000588952 NFIAQ12857 509 aa24.07■■□□□ 1.44
DNMT1-216ENST00000588952 EAPPQ56P03 285 aaPredicted RBP24.07■■□□□ 1.44
DNMT1-216ENST00000588952 TEX11Q8IYF3 940 aa24.07■■□□□ 1.44
DNMT1-216ENST00000588952 ESYT1Q9BSJ8 1104 aa24.07■■□□□ 1.44
DNMT1-216ENST00000588952 DDX4Q9NQI0 724 aaKnown RBP24.07■■□□□ 1.44
DNMT1-216ENST00000588952 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
DNMT1-216ENST00000588952 FOCADQ5VW36 1801 aa24.06■■□□□ 1.44
DNMT1-216ENST00000588952 ANGEL2Q5VTE6 544 aaKnown RBP24.06■■□□□ 1.44
DNMT1-216ENST00000588952 GGA3Q9NZ52 723 aa24.06■■□□□ 1.44
DNMT1-216ENST00000588952 CCDC171Q6TFL3 1326 aa24.06■■□□□ 1.44
DNMT1-216ENST00000588952 PLCG2P16885 1265 aa24.05■■□□□ 1.44
DNMT1-216ENST00000588952 VPS53Q5VIR6 699 aa24.05■■□□□ 1.44
DNMT1-216ENST00000588952 SDR42E1Q8WUS8 393 aa24.05■■□□□ 1.44
DNMT1-216ENST00000588952 VEZTQ9HBM0 779 aa24.05■■□□□ 1.44
DNMT1-216ENST00000588952 FAM198AQ9UFP1 575 aa24.05■■□□□ 1.44
DNMT1-216ENST00000588952 RAD50Q92878 1312 aa24.05■■□□□ 1.44
DNMT1-216ENST00000588952 TGFBRAP1Q8WUH2 860 aa24.04■■□□□ 1.44
DNMT1-216ENST00000588952 RUFY2Q8WXA3 655 aa24.04■■□□□ 1.44
DNMT1-216ENST00000588952 CRNKL1Q9BZJ0 848 aaKnown RBP24.04■■□□□ 1.44
DNMT1-216ENST00000588952 GPBP1L1Q9HC44 474 aaPredicted RBP24.04■■□□□ 1.44
DNMT1-216ENST00000588952 CNTNAP1P78357 1384 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 TCP10L2B9ZVM9 353 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 MYO1BO43795 1136 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 C8orf34Q49A92 452 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 PNMA8AQ86V59 439 aaPredicted RBP24.03■■□□□ 1.44
DNMT1-216ENST00000588952 CERS3Q8IU89 383 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 MAPKAPK5Q8IW41 473 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 ZFPM1Q8IX07 1006 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 IDI2Q9BXS1 227 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 EPB41L4AQ9HCS5 686 aaPredicted RBP24.03■■□□□ 1.44
DNMT1-216ENST00000588952 SLC4A4Q9Y6R1 1079 aa24.03■■□□□ 1.44
DNMT1-216ENST00000588952 DDX60LQ5H9U9 1706 aaKnown RBP24.03■■□□□ 1.44
DNMT1-216ENST00000588952 GSG1L2A8MUP6 293 aa24.02■■□□□ 1.44
DNMT1-216ENST00000588952 PICALMQ13492 652 aa24.02■■□□□ 1.44
DNMT1-216ENST00000588952 CASC1Q6TDU7 716 aa24.02■■□□□ 1.44
DNMT1-216ENST00000588952 MKRN1Q9UHC7 482 aaKnown RBP24.02■■□□□ 1.44
DNMT1-216ENST00000588952 PGAP2Q9UHJ9 254 aa24.02■■□□□ 1.44
DNMT1-216ENST00000588952 FLT1P17948 1338 aa24.02■■□□□ 1.44
DNMT1-216ENST00000588952 NAV1Q8NEY1 1877 aa24.02■■□□□ 1.44
DNMT1-216ENST00000588952 KIF3CO14782 793 aa24.01■■□□□ 1.43
DNMT1-216ENST00000588952 ZNF784Q8NCA9 323 aaPredicted RBP24.01■■□□□ 1.43
DNMT1-216ENST00000588952 TMOD2Q9NZR1 351 aa24.01■■□□□ 1.43
DNMT1-216ENST00000588952 HSPD1P10809 573 aaKnown RBP24■■□□□ 1.43
DNMT1-216ENST00000588952 USP5P45974 858 aa24■■□□□ 1.43
DNMT1-216ENST00000588952 PTH1RQ03431 593 aa24■■□□□ 1.43
DNMT1-216ENST00000588952 TCP10Q12799 353 aa24■■□□□ 1.43
DNMT1-216ENST00000588952 ZC3H15Q8WU90 426 aaKnown RBP24■■□□□ 1.43
DNMT1-216ENST00000588952 DCP1AQ9NPI6 582 aaPredicted RBP24■■□□□ 1.43
DNMT1-216ENST00000588952 PITPNM2Q9BZ72 1349 aa24■■□□□ 1.43
DNMT1-216ENST00000588952 PATL2C9JE40 543 aaKnown RBP23.99■■□□□ 1.43
DNMT1-216ENST00000588952 GNAT2P19087 354 aa23.99■■□□□ 1.43
DNMT1-216ENST00000588952 FKBP1CQ5VVH2 108 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms