RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 PPP6R2O75170 966 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 TUBB4AP04350 444 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 PCP11498 1178 aaKnown RBP8.31□□□□□ -1.08
SPIDR-228ENST00000588781 FGFR2P21802 821 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 CMA1P23946 247 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 HAND2P61296 217 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 HLFQ16534 295 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 MYSM1Q5VVJ2 828 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 ANO1Q5XXA6 986 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 TTLL5Q6EMB2 1281 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 LUZP1Q86V48 1076 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 SGMS1Q86VZ5 419 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 VGLL2Q8N8G2 317 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 SPATA5Q8NB90 893 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 LINC00301Q8NCQ3 95 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 KIAA1524Q8TCG1 905 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 ALG1Q9BT22 464 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 PUS7LQ9H0K6 701 aaKnown RBP8.31□□□□□ -1.08
SPIDR-228ENST00000588781 DNAJC25Q9H1X3 360 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 NCOA5Q9HCD5 579 aaKnown RBP8.31□□□□□ -1.08
SPIDR-228ENST00000588781 IMPACTQ9P2X3 320 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 CLIP2Q9UDT6 1046 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 ZBTB1Q9Y2K1 713 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 NID2Q14112 1375 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 WNK3Q9BYP7 1800 aa8.31□□□□□ -1.08
SPIDR-228ENST00000588781 PNPLA7Q6ZV29 1317 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 ZNF532Q9HCE3 1301 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 CICQ96RK0 1608 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 GOLGA8AA7E2F4 631 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 CCP110O43303 1012 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 CBFA2T2O43439 604 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 CUTAO60888 179 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 SLC3A2P08195 630 aaKnown RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 XBP1P17861 261 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 IARSP41252 1262 aaKnown RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 KIF23Q02241 960 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 CEBPZQ03701 1054 aaKnown RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 DDB1Q16531 1140 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 TMEM67Q5HYA8 995 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 ELOA2Q8IYF1 753 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 SPC24Q8NBT2 197 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 ENGASEQ8NFI3 743 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC85AQ96PX6 553 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 STRBPQ96SI9 672 aaKnown RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 TTC12Q9H892 705 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-228ENST00000588781 PCDHA7Q9UN72 937 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
SPIDR-228ENST00000588781 NUP98P52948 1817 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 IFIT3O14879 490 aaKnown RBP8.29□□□□□ -1.08
SPIDR-228ENST00000588781 BMP15O95972 392 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 FDPSP14324 419 aaKnown RBP8.29□□□□□ -1.08
SPIDR-228ENST00000588781 PHKA1P46020 1223 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 TDO2P48775 406 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 FOSBP53539 338 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 ANTXR2P58335 489 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 NLRP12P59046 1061 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 AKAP17AQ02040 695 aaKnown RBP8.29□□□□□ -1.08
SPIDR-228ENST00000588781 SCARF1Q14162 830 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 SLC39A14Q15043 492 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 IQCB1Q15051 598 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 AKNAD1Q5T1N1 836 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 APOA5Q6Q788 366 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 CLEC4GQ6UXB4 293 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 MFSD6Q6ZSS7 791 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 CHST3Q7LGC8 479 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC186Q7Z3E2 898 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 FMR1NBQ8N0W7 255 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-228ENST00000588781 CCDC150Q8NCX0 1101 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 STAG1Q8WVM7 1258 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 PIH1D3Q9NQM4 214 aaKnown RBP8.29□□□□□ -1.08
SPIDR-228ENST00000588781 KIAA1468Q9P260 1216 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 HPS5Q9UPZ3 1129 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 PAXBP1Q9Y5B6 917 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 UTRNP46939 3433 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 TIAM2Q8IVF5 1701 aa8.29□□□□□ -1.08
SPIDR-228ENST00000588781 RREB1Q92766 1687 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 TCRBV5S4A2TA0A5A2 114 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 SEMA3EO15041 775 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 CHGBP05060 677 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 CALM1P0DP23 149 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 CALM2P0DP24 149 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 CALM3P0DP25 149 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 IFNAR1P17181 557 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 PTGS1P23219 599 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 GUCY1B3Q02153 619 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 SNW1Q13573 536 aaKnown RBP8.28□□□□□ -1.08
SPIDR-228ENST00000588781 COL9A3Q14050 684 aaPredicted RBP8.28□□□□□ -1.08
SPIDR-228ENST00000588781 UBE4AQ14139 1066 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 WTAPQ15007 396 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 SYCP1Q15431 976 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 KANK3Q6NY19 840 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 OLFM4Q6UX06 510 aa8.28□□□□□ -1.08
SPIDR-228ENST00000588781 IFNL3Q8IZI9 196 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms