RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 RTN1Q16799 776 aa8.71□□□□□ -1.02
ZNF554-202ENST00000588534 AKNAD1Q5T1N1 836 aa8.71□□□□□ -1.02
ZNF554-202ENST00000588534 FOXD4L5Q5VV16 416 aaPredicted RBP8.71□□□□□ -1.02
ZNF554-202ENST00000588534 DCAF15Q66K64 600 aa8.71□□□□□ -1.02
ZNF554-202ENST00000588534 CIAPIN1Q6FI81 312 aa8.71□□□□□ -1.02
ZNF554-202ENST00000588534 FOXD4L4Q8WXT5 416 aaPredicted RBP8.71□□□□□ -1.02
ZNF554-202ENST00000588534 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
ZNF554-202ENST00000588534 DHX36Q9H2U1 1008 aaKnown RBP8.71□□□□□ -1.02
ZNF554-202ENST00000588534 STX8Q9UNK0 236 aa8.71□□□□□ -1.02
ZNF554-202ENST00000588534 RGPD1P0DJD0 1748 aa8.71□□□□□ -1.02
ZNF554-202ENST00000588534 RPS6KB1P23443 525 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 RASGRF1Q13972 1273 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 DOK7Q18PE1 504 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 CCDC148Q8NFR7 591 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 MAP4K1Q92918 833 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 CCDC17Q96LX7 622 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 LZTS2Q9BRK4 669 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 TLR7Q9NYK1 1049 aaKnown RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 STK38Q15208 465 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 Q6ZUG5 572 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 IFNL3Q8IZI9 196 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 CUL5Q93034 780 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 TRIM44Q96DX7 344 aaPredicted RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 LLPHQ9BRT6 129 aaKnown RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 SWAP70Q9UH65 585 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 LRP6O75581 1613 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 HSPD1P10809 573 aaKnown RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 ZSCAN16Q9H4T2 348 aaPredicted RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 POLRMTO00411 1230 aaKnown RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 C21orf2O43822 256 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 TMX3Q96JJ7 454 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 SCAND2PQ9GZW5 306 aaPredicted RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 PNMA2Q9UL42 364 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 ANGEL1Q9UNK9 670 aaKnown RBP8.7□□□□□ -1.02
ZNF554-202ENST00000588534 CD2APQ9Y5K6 639 aa8.7□□□□□ -1.02
ZNF554-202ENST00000588534 BMP15O95972 392 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 BTDP43251 543 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 GPSM2P81274 684 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 TBC1D16Q8TBP0 767 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 GLT8D2Q9H1C3 349 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 ORC3Q9UBD5 711 aaPredicted RBP8.69□□□□□ -1.02
ZNF554-202ENST00000588534 SNX14Q9Y5W7 946 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 A0A0D9SFI3 127 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 GRIN3BO60391 1043 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 PPARAQ07869 468 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
ZNF554-202ENST00000588534 FAM84BQ96KN1 310 aaPredicted RBP8.69□□□□□ -1.02
ZNF554-202ENST00000588534 MTA3Q9BTC8 594 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 JAG2Q9Y219 1238 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 CALML3P27482 149 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 MCAMP43121 646 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 FBXO33Q7Z6M2 555 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
ZNF554-202ENST00000588534 PDS5AQ29RF7 1337 aaKnown RBP8.68□□□□□ -1.02
ZNF554-202ENST00000588534 NWD2Q9ULI1 1742 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 KDM4AO75164 1064 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 PTMAP06454 111 aaKnown RBP8.68□□□□□ -1.02
ZNF554-202ENST00000588534 SRGNP10124 158 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 TM4SF1P30408 202 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 LRP10Q7Z4F1 713 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 MICU3Q86XE3 530 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 TGFBRAP1Q8WUH2 860 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 ALX1Q15699 326 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 CCDC129Q6ZRS4 1044 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 USP48Q86UV5 1035 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 EDC3Q96F86 508 aaKnown RBP8.68□□□□□ -1.02
ZNF554-202ENST00000588534 MPHOSPH6Q99547 160 aaKnown RBP8.68□□□□□ -1.02
ZNF554-202ENST00000588534 LRRC4BQ9NT99 713 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
ZNF554-202ENST00000588534 KIAA0825Q8IV33 1275 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 CCDC43Q96MW1 224 aaKnown RBP8.68□□□□□ -1.02
ZNF554-202ENST00000588534 PICK1Q9NRD5 415 aa8.68□□□□□ -1.02
ZNF554-202ENST00000588534 USP17L12C9JPN9 530 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 USP17L21D6R901 530 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 RAB34Q9BZG1 259 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 LSG1Q9H089 658 aaKnown RBP8.67□□□□□ -1.02
ZNF554-202ENST00000588534 FAM13BQ9NYF5 915 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 FGAP02671 866 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 NLRP5P59047 1200 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 HDLBPQ00341 1268 aaKnown RBP8.67□□□□□ -1.02
ZNF554-202ENST00000588534 FOXP4Q8IVH2 680 aaPredicted RBP8.67□□□□□ -1.02
ZNF554-202ENST00000588534 DDX11Q96FC9 970 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 DBNDD1Q9H9R9 158 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 ZNRF3Q9ULT6 936 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 B4DLN1 442 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 E7EWF7 191 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 ECE2O60344 883 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 MRPL12P52815 198 aaKnown RBP8.67□□□□□ -1.02
ZNF554-202ENST00000588534 AK2P54819 239 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 SUPT20HL1Q3ZLR7 823 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 MAPKAPK5Q8IW41 473 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 AKT1S1Q96B36 256 aa8.67□□□□□ -1.02
ZNF554-202ENST00000588534 PYM1Q9BRP8 204 aaKnown RBP8.67□□□□□ -1.02
ZNF554-202ENST00000588534 PIH1D3Q9NQM4 214 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms