RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 SRGAP3O43295 1099 aa23.33■■□□□ 1.33
TRIM47-205ENST00000587774 MTX1Q13505 466 aa23.33■■□□□ 1.33
TRIM47-205ENST00000587774 ATF7IPQ6VMQ6 1270 aa23.33■■□□□ 1.33
TRIM47-205ENST00000587774 FRAT1Q92837 279 aaPredicted RBP23.33■■□□□ 1.33
TRIM47-205ENST00000587774 PTPN18Q99952 460 aa23.33■■□□□ 1.33
TRIM47-205ENST00000587774 CSADQ9Y600 493 aa23.33■■□□□ 1.33
TRIM47-205ENST00000587774 SALL1Q9NSC2 1324 aa23.33■■□□□ 1.32
TRIM47-205ENST00000587774 SEMA3EO15041 775 aa23.32■■□□□ 1.32
TRIM47-205ENST00000587774 MAP3K9P80192 1104 aa23.32■■□□□ 1.32
TRIM47-205ENST00000587774 CRHR2Q13324 411 aa23.32■■□□□ 1.32
TRIM47-205ENST00000587774 MS4A4AQ96JQ5 239 aa23.32■■□□□ 1.32
TRIM47-205ENST00000587774 DENND2AQ9ULE3 1009 aa23.32■■□□□ 1.32
TRIM47-205ENST00000587774 IPO8O15397 1037 aaKnown RBP23.31■■□□□ 1.32
TRIM47-205ENST00000587774 LDHBP07195 334 aaKnown RBP23.31■■□□□ 1.32
TRIM47-205ENST00000587774 CCDC102BQ68D86 513 aa23.31■■□□□ 1.32
TRIM47-205ENST00000587774 FBXO46Q6PJ61 603 aaPredicted RBP23.31■■□□□ 1.32
TRIM47-205ENST00000587774 OTUD5Q96G74 571 aa23.31■■□□□ 1.32
TRIM47-205ENST00000587774 WRNIP1Q96S55 665 aa23.31■■□□□ 1.32
TRIM47-205ENST00000587774 SNCAIPQ9Y6H5 919 aa23.31■■□□□ 1.32
TRIM47-205ENST00000587774 OTUD7BQ6GQQ9 843 aa23.3■■□□□ 1.32
TRIM47-205ENST00000587774 CLUAP1Q96AJ1 413 aa23.3■■□□□ 1.32
TRIM47-205ENST00000587774 A0A1B0GUL7 405 aa23.29■■□□□ 1.32
TRIM47-205ENST00000587774 SPDYE5A6NIY4 337 aa23.29■■□□□ 1.32
TRIM47-205ENST00000587774 TIMM10P62072 90 aa23.29■■□□□ 1.32
TRIM47-205ENST00000587774 RASGRF1Q13972 1273 aa23.29■■□□□ 1.32
TRIM47-205ENST00000587774 CDC42EP5Q6NZY7 148 aa23.29■■□□□ 1.32
TRIM47-205ENST00000587774 BRI3BPQ8WY22 251 aa23.29■■□□□ 1.32
TRIM47-205ENST00000587774 ZKSCAN4Q969J2 545 aaPredicted RBP23.29■■□□□ 1.32
TRIM47-205ENST00000587774 HOOK2Q96ED9 719 aa23.29■■□□□ 1.32
TRIM47-205ENST00000587774 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.29■■□□□ 1.32
TRIM47-205ENST00000587774 KIAA0100Q14667 2235 aaKnown RBP23.28■■□□□ 1.32
TRIM47-205ENST00000587774 ZBTB22O15209 634 aa23.28■■□□□ 1.32
TRIM47-205ENST00000587774 TFCP2Q12800 502 aa23.28■■□□□ 1.32
TRIM47-205ENST00000587774 NFIAQ12857 509 aa23.28■■□□□ 1.32
TRIM47-205ENST00000587774 FAM151AQ8WW52 585 aa23.28■■□□□ 1.32
TRIM47-205ENST00000587774 RFX7Q2KHR2 1363 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 CCL15-CCL14A0A0B4J2E2 113 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 GNAI2P04899 355 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 GTF2A2P52657 109 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 HNRNPUQ00839 825 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRIM47-205ENST00000587774 TCP10Q12799 353 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 CCL15Q16663 113 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 DCAF15Q66K64 600 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 MIER1Q8N108 512 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 TRIM17Q9Y577 477 aa23.27■■□□□ 1.32
TRIM47-205ENST00000587774 PDS5AQ29RF7 1337 aaKnown RBP23.27■■□□□ 1.32
TRIM47-205ENST00000587774 SIPA1L1O43166 1804 aa23.26■■□□□ 1.31
TRIM47-205ENST00000587774 PNMA6EA0A0J9YXQ4 647 aa23.26■■□□□ 1.31
TRIM47-205ENST00000587774 MIGA2Q7L4E1 593 aa23.26■■□□□ 1.31
TRIM47-205ENST00000587774 OTOP1Q7RTM1 612 aa23.26■■□□□ 1.31
TRIM47-205ENST00000587774 ZGPATQ8N5A5 531 aaKnown RBP23.26■■□□□ 1.31
TRIM47-205ENST00000587774 XAGE2Q96GT9 111 aa23.26■■□□□ 1.31
TRIM47-205ENST00000587774 FAM198AQ9UFP1 575 aa23.26■■□□□ 1.31
TRIM47-205ENST00000587774 AKAP2Q9Y2D5 859 aa23.26■■□□□ 1.31
TRIM47-205ENST00000587774 ERO1BQ86YB8 467 aa23.25■■□□□ 1.31
TRIM47-205ENST00000587774 TMEM57Q8N5G2 664 aa23.25■■□□□ 1.31
TRIM47-205ENST00000587774 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
TRIM47-205ENST00000587774 ZNF341Q9BYN7 854 aa23.25■■□□□ 1.31
TRIM47-205ENST00000587774 GAKO14976 1311 aa23.25■■□□□ 1.31
TRIM47-205ENST00000587774 MVPQ14764 893 aaKnown RBP23.24■■□□□ 1.31
TRIM47-205ENST00000587774 ZKSCAN2Q63HK3 967 aa23.24■■□□□ 1.31
TRIM47-205ENST00000587774 DZIP1Q86YF9 867 aaKnown RBP23.24■■□□□ 1.31
TRIM47-205ENST00000587774 FAM43AQ8N2R8 423 aa23.24■■□□□ 1.31
TRIM47-205ENST00000587774 ERO1AQ96HE7 468 aa23.24■■□□□ 1.31
TRIM47-205ENST00000587774 USP40Q9NVE5 1235 aa23.24■■□□□ 1.31
TRIM47-205ENST00000587774 ABCF2Q9UG63 623 aa23.24■■□□□ 1.31
TRIM47-205ENST00000587774 IRF6O14896 467 aa23.23■■□□□ 1.31
TRIM47-205ENST00000587774 INPP5BP32019 993 aa23.23■■□□□ 1.31
TRIM47-205ENST00000587774 CAP1Q01518 475 aa23.23■■□□□ 1.31
TRIM47-205ENST00000587774 TAF1CQ15572 869 aaPredicted RBP23.23■■□□□ 1.31
TRIM47-205ENST00000587774 MYH1P12882 1939 aa23.23■■□□□ 1.31
TRIM47-205ENST00000587774 ATRNL1Q5VV63 1379 aa23.23■■□□□ 1.31
TRIM47-205ENST00000587774 SP3Q02447 781 aa23.22■■□□□ 1.31
TRIM47-205ENST00000587774 PPIL2Q13356 520 aa23.22■■□□□ 1.31
TRIM47-205ENST00000587774 DIEXFQ68CQ4 756 aaKnown RBP23.22■■□□□ 1.31
TRIM47-205ENST00000587774 NEUROD6Q96NK8 337 aa23.22■■□□□ 1.31
TRIM47-205ENST00000587774 ZFPM1Q8IX07 1006 aa23.21■■□□□ 1.31
TRIM47-205ENST00000587774 LOC285556D6RIA3 1793 aa23.21■■□□□ 1.31
TRIM47-205ENST00000587774 MROH7-TTC4A0A0A0MT08 1334 aa23.2■■□□□ 1.3
TRIM47-205ENST00000587774 CETPP11597 493 aa23.2■■□□□ 1.3
TRIM47-205ENST00000587774 RGS3P49796 1198 aa23.2■■□□□ 1.3
TRIM47-205ENST00000587774 SNAPC2Q13487 334 aa23.2■■□□□ 1.3
TRIM47-205ENST00000587774 PI16Q6UXB8 463 aa23.2■■□□□ 1.3
TRIM47-205ENST00000587774 ZFYVE28Q9HCC9 887 aa23.2■■□□□ 1.3
TRIM47-205ENST00000587774 ZNF112Q9UJU3 913 aa23.2■■□□□ 1.3
TRIM47-205ENST00000587774 PPATQ06203 517 aa23.19■■□□□ 1.3
TRIM47-205ENST00000587774 IDI2Q9BXS1 227 aa23.19■■□□□ 1.3
TRIM47-205ENST00000587774 HMG20BQ9P0W2 317 aa23.19■■□□□ 1.3
TRIM47-205ENST00000587774 BTBD19C9JJ37 291 aa23.18■■□□□ 1.3
TRIM47-205ENST00000587774 MECOMQ03112 1051 aa23.18■■□□□ 1.3
TRIM47-205ENST00000587774 G3BP1Q13283 466 aaKnown RBP eCLIP23.18■■□□□ 1.3
TRIM47-205ENST00000587774 SPTY2D1Q68D10 685 aaPredicted RBP23.18■■□□□ 1.3
TRIM47-205ENST00000587774 SLF2Q8IX21 1173 aa23.18■■□□□ 1.3
TRIM47-205ENST00000587774 ZNF384Q8TF68 577 aa23.18■■□□□ 1.3
TRIM47-205ENST00000587774 EFCC1Q9HA90 598 aa23.18■■□□□ 1.3
TRIM47-205ENST00000587774 PTPN22Q9Y2R2 807 aa23.18■■□□□ 1.3
TRIM47-205ENST00000587774 DOCK3Q8IZD9 2030 aa23.17■■□□□ 1.3
TRIM47-205ENST00000587774 ENTPD3O75355 529 aa23.17■■□□□ 1.3
TRIM47-205ENST00000587774 WDHD1O75717 1129 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-205ENST00000587774 ARID4AP29374 1257 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms