RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SPTLC2O15270 562 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 NRDCO43847 1150 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 HSP90AA4PQ58FG1 418 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 STRBPQ96SI9 672 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 LLPHQ9BRT6 129 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 CCDC196A0A1B0GTZ2 297 aa14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 ST5P78524 1137 aa14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 ZNF444Q8N0Y2 327 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 PLA2G12BQ9BX93 195 aa14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 ZNF274Q96GC6 653 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 ST3GAL1Q11201 340 aa14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 PICALMQ13492 652 aa14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 ZSCAN29Q8IWY8 852 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 ARHGEF1Q92888 912 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 CCDC34Q96HJ3 373 aa14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 BCL9O00512 1426 aa14.43□□□□□ -0.1
SMARCA4-208ENST00000585799 FAM208AQ9UK61 1670 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 LDHBP07195 334 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 TPD52L1Q16890 204 aaPredicted RBP14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 MSL1Q68DK7 614 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 CLEC17AQ6ZS10 378 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 CEP57L1Q8IYX8 460 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 TRIM34Q9BYJ4 488 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 GNAT2P19087 354 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 KRT40Q6A162 431 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 CYB5R4Q7L1T6 521 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 WASF1Q92558 559 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 ZSWIM5Q9P217 1185 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 C3orf67Q6ZVT6 689 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 NAT10Q9H0A0 1025 aaKnown RBP14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 MINPP1Q9UNW1 487 aa14.42□□□□□ -0.1
SMARCA4-208ENST00000585799 ZNF142P52746 1687 aaPredicted RBP14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 PPARAQ07869 468 aa14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 ANKRD2Q9GZV1 360 aa14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 AFF2P51816 1311 aa14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 NTSR2O95665 410 aa14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 NLRP5P59047 1200 aa14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 TMEM87BQ96K49 555 aa14.41□□□□□ -0.1
SMARCA4-208ENST00000585799 RPS6KA4O75676 772 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 PDE4BQ07343 736 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 APOA5Q6Q788 366 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 OLFM4Q6UX06 510 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 C17orf53Q8N3J3 647 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 FAM200AQ8TCP9 573 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 SENP2Q9HC62 589 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 V9GY48 417 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 PRDX5P30044 214 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 UBE4AQ14139 1066 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 MAPKAPK5Q8IW41 473 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 CLIC4Q9Y696 253 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 NEDD4P46934 1319 aa14.4□□□□□ -0.1
SMARCA4-208ENST00000585799 BAG3O95817 575 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 IKQ13123 557 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 RESTQ13127 1097 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 KLHL10Q6JEL2 608 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 FAM13BQ9NYF5 915 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 ZNF804BA4D1E1 1349 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 DIXDC1Q155Q3 683 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 SPTY2D1Q68D10 685 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 CNNM3Q8NE01 707 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 KAT14Q9H8E8 782 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 ANO10Q9NW15 660 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 CACNA1FO60840 1977 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 KLRK1P26718 216 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 SYKP43405 635 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 TSGA10IPQ3SY00 556 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 NARFQ9UHQ1 456 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 CARMIL3Q8ND23 1372 aa14.39□□□□□ -0.11
SMARCA4-208ENST00000585799 DIS3L2Q8IYB7 885 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 CABP5Q9NP86 173 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 EXOSC10Q01780 885 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 MYSM1Q5VVJ2 828 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 CLEC4GQ6UXB4 293 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 ZNF804AQ7Z570 1209 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 FBXO18Q8NFZ0 1043 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 KCNG4Q8TDN1 519 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 TGFBRAP1Q8WUH2 860 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 HOOK1Q9UJC3 728 aaKnown RBP14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 TSPY3P0CV98 308 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 TSPY8P0CW00 308 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 ANO1Q5XXA6 986 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 MB21D2Q8IYB1 491 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 ZNF654Q8IZM8 581 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 AOPEPQ8N6M6 819 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 VPS54Q9P1Q0 977 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 TNKSO95271 1327 aa14.38□□□□□ -0.11
SMARCA4-208ENST00000585799 BTBD18B2RXH4 712 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 SERPINC1P01008 464 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 LDHCP07864 332 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 HSPA1LP34931 641 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 RBM10P98175 930 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 TMTC2Q8N394 836 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 GSG1L2A8MUP6 293 aa14.37□□□□□ -0.11
SMARCA4-208ENST00000585799 EIF6P56537 245 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms